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WormBase Tree Display for Gene: WBGene00268022

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Name Class

WBGene00268022SMapS_parentSequenceSRAE_chrX_scaffold6
IdentityVersion1
NameSequence_nameSRAE_X000243600
Molecular_nameSRAE_X000243600
SRAE_X000243600.1
SRP11703
Other_nameSR00257Person_evidenceWBPerson2951
Sr_gal_11Paper_evidenceWBPaper00055176
Curator_confirmedWBPerson4055
Public_nameSRAE_X000243600
SpeciesStrongyloides ratti
HistoryVersion_change101 May 2015 10:45:54WBPerson4055EventCreated
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:0000677101.075From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272504
102.169From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272498
113.322From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272502
115.689From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272503
118.112From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272496
120.172From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272497
WBls:000067826.0839From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272493
26.6182From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272501
27.244From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272495
27.6365From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272499
36.5089From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272500
37.2425From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272494
41.2076From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322576
42.8361From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322575
WBls:000068017.0074From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000680.Unknown.WBbt:0007833.ERP001672.ERX200444
WBls:0000682416.999From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000682.Unknown.WBbt:0007833.ERP001672.ERX200443
GO_annotation00279055
Ortholog (30)
ParalogWBGene00257810Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00261160Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00262360Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00262516Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00265360Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00266605Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00266718Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00268160Strongyloides rattiFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable carbohydrate binding activity. Is an ortholog of C. elegans lec-11. In C. elegans, lec-11 is involved in innate immune response.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSSRAE_X000243600
Corresponding_transcriptSRAE_X000243600.1
Other_sequence (23)
Experimental_infoExpression_clusterWBPaper00050919:down_infective-L3_vs_free-living_mRNA
WBPaper00050919:down_parasitic_vs_free-living_mRNA
ReferenceWBPaper00055176
MethodGene