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WormBase Tree Display for Gene: WBGene00264528

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Name Class

WBGene00264528SMapS_parentSequenceSRAE_chr2
IdentityVersion1
NameSequence_nameSRAE_2000429800
Molecular_nameSRAE_2000429800
SRAE_2000429800.1
SRP03313
Other_nameSR01679Person_evidenceWBPerson2951
Public_nameSRAE_2000429800
SpeciesStrongyloides ratti
HistoryVersion_change101 May 2015 10:45:54WBPerson4055EventCreated
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:00006772.51401From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272496
2.95648From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272502
3.84005From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272498
4.08629From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272497
4.37392From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272503
4.5306From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272504
WBls:000067817.7034From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322575
20.9747From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322576
28.9168From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272494
29.4981From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272500
41.2556From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272495
41.2717From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272501
55.0524From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272493
55.2611From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272499
WBls:00006800.368226From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000680.Unknown.WBbt:0007833.ERP001672.ERX200444
WBls:00006820From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000682.Unknown.WBbt:0007833.ERP001672.ERX200443
GO_annotation00274824
00274825
00274826
00274827
Ortholog (32)
ParalogWBGene00258465Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00259077Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00262924Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00264529Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00264535Strongyloides rattiFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable sphingomyelin phosphodiesterase activity. Predicted to be involved in sphingomyelin catabolic process. Is an ortholog of C. elegans asm-2. In C. elegans, asm-2 is involved in ceramide biosynthetic process and sphingomyelin catabolic process.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSSRAE_2000429800
Corresponding_transcriptSRAE_2000429800.1
Other_sequenceSR01679
CJC12041_1
FC818689.1
FC812976.1
SRC03337_1
Experimental_infoExpression_clusterWBPaper00050919:down_infective-L3_vs_free-living_mRNA
WBPaper00050919:down_infective-L3_vs_parasitic_mRNA
WBPaper00050919:up_parasitic_vs_free-living_mRNA
MethodGene