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WormBase Tree Display for Gene: WBGene00260945

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Name Class

WBGene00260945SMapS_parentSequenceSRAE_chr2
IdentityVersion1
NameSequence_nameSRAE_2000074500
Molecular_nameSRAE_2000074500
SRAE_2000074500.1
SRP10938
Other_nameSR03377Person_evidenceWBPerson2951
SR00990Person_evidenceWBPerson2951
Public_nameSRAE_2000074500
SpeciesStrongyloides ratti
HistoryVersion_change101 May 2015 10:45:53WBPerson4055EventCreated
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:00006773614.6From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272498
3626.22From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272503
3649.71From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272497
3657.02From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272504
3832.76From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272496
3847.81From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272502
WBls:00006783454.81From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322575
4757.35From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272500
4772.9From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272494
4815.16From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272501
4842.43From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272495
5276.35From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322576
5555.13From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272493
5564.17From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272499
WBls:0000680816.986From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000680.Unknown.WBbt:0007833.ERP001672.ERX200444
WBls:00006828060.29From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000682.Unknown.WBbt:0007833.ERP001672.ERX200443
GO_annotation00269881
00269882
Ortholog (116)
ParalogWBGene00255873Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00256620Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00258690Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00258870Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00260947Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00261178Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00262016Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00262658Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00263341Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00265951Strongyloides rattiFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable peptidyl-prolyl cis-trans isomerase activity. Is an ortholog of C. elegans cyn-1; cyn-7; and cyn-3.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSSRAE_2000074500
Corresponding_transcriptSRAE_2000074500.1
Other_sequence (269)
Experimental_infoExpression_clusterWBPaper00050919:down_infective-L3_vs_free-living_mRNA
WBPaper00050919:down_infective-L3_vs_parasitic_mRNA
WBPaper00050919:up_parasitic_vs_free-living_protein
MethodGene