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WormBase Tree Display for Gene: WBGene00260507

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Name Class

WBGene00260507SMapS_parentSequenceSRAE_chr2
IdentityVersion1
NameSequence_nameSRAE_2000031400
Molecular_nameSRAE_2000031400
SRAE_2000031400.1
SRP11808
Public_nameSRAE_2000031400
SpeciesStrongyloides ratti
HistoryVersion_change101 May 2015 10:45:53WBPerson4055EventCreated
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:000067756.478From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272502
59.0656From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272496
59.0999From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272497
60.0725From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272498
60.7095From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272503
61.6998From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272504
WBls:000067815.8854From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322576
20.3242From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322575
32.126From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272494
32.8885From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272500
35.0219From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272493
35.1824From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272499
38.609From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272495
39.3662From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272501
WBls:00006806.9061From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000680.Unknown.WBbt:0007833.ERP001672.ERX200444
WBls:00006821.79877From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000682.Unknown.WBbt:0007833.ERP001672.ERX200443
GO_annotation00269374
00269375
00269376
00269377
00269378
OrthologWBGene00234052Brugia malayiFrom_analysisWormBase-Compara
WBGene00246833Onchocerca volvulusFrom_analysisWormBase-Compara
Pan_g19607Panagrellus redivivusFrom_analysisWormBase-Compara
WBGene00288462Trichuris murisFrom_analysisWormBase-Compara
Paralog (12)
Structured_descriptionAutomated_descriptionPredicted to enable ATP binding activity; RNA binding activity; and RNA helicase activity. Predicted to be involved in RNA catabolic process. Is an ortholog of B. malayi Bma-mtr-4.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSSRAE_2000031400
Corresponding_transcriptSRAE_2000031400.1
Other_sequence (67)
Experimental_infoExpression_clusterWBPaper00050919:down_infective-L3_vs_free-living_mRNA
WBPaper00050919:down_infective-L3_vs_parasitic_mRNA
MethodGene