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WormBase Tree Display for Gene: WBGene00248765

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Name Class

WBGene00248765SMapS_parentSequenceOVOC_OM1a_31
IdentityVersion2
NameCGC_nameOvo-cpn-3From_analysisInferred_from_orthology
Sequence_nameOVOC11956
Molecular_nameOVOC11956
OVOC11956.1
OVP00822
Public_nameOvo-cpn-3
SpeciesOnchocerca volvulus
HistoryVersion_change129 Nov 2013 15:05:34WBPerson3111EventImportedMAKER import
224 Jan 2014 16:01:33WBPerson4055Name_changeCGC_nameOvo-cpn-3
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classcpn
RNASeq_FPKMWBls:0000101159.264From_analysisRNASeq.ovolvulus.total_over_all_stages.control_median
592.748From_analysisRNASeq.ovolvulus.total_over_all_stages.control_mean
WBls:0000104 (16)
WBls:00001073933.99From_analysisRNASeq.ovolvulus.WBls:0000107.control_mean
RNASeq.ovolvulus.WBls:0000107.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
WBls:00001081261.23From_analysisRNASeq.ovolvulus.WBls:0000108.control_mean
2714.98From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
529.829From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
538.869From_analysisRNASeq.ovolvulus.WBls:0000108.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
WBls:00006641572.54From_analysisRNASeq.ovolvulus.WBls:0000664.control_mean
RNASeq.ovolvulus.WBls:0000664.control_median
2595.49From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
549.583From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
Ortholog (30)
ParalogWBGene00237446Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00237667Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00237669Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00239807Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00243222Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00248048Onchocerca volvulusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Smooth muscle protein/calponin; CH domain superfamily; Calponin homology domain; and Calponin homology (CH) domain. Is an ortholog of C. elegans cpn-3.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSOVOC11956
Corresponding_transcriptOVOC11956.1
Other_sequence (285)
Experimental_infoExpression_clusterWBPaper00048881:immunoreactive
MethodGene