WormBase Tree Display for Gene: WBGene00247539
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WBGene00247539 | SMap | S_parent | Sequence | OVOC_OM4_111 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | Ovo-deg-3 | From_analysis | Inferred_from_orthology | |||||
Sequence_name | OVOC10730 | ||||||||
Molecular_name | OVOC10730a | ||||||||
OVOC10730a.1 | |||||||||
OVP14751 | |||||||||
OVOC10730a.2 | |||||||||
Public_name | Ovo-deg-3 | ||||||||
Species | Onchocerca volvulus | ||||||||
History | Version_change | 1 | 29 Nov 2013 15:05:34 | WBPerson3111 | Event | Imported | MAKER import | ||
2 | 24 Jan 2014 16:01:33 | WBPerson4055 | Name_change | CGC_name | Ovo-deg-3 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | deg | ||||||||
RNASeq_FPKM | WBls:0000101 | 2.03677 | From_analysis | RNASeq.ovolvulus.total_over_all_stages.control_median | |||||
2.52759 | From_analysis | RNASeq.ovolvulus.total_over_all_stages.control_mean | |||||||
WBls:0000104 (16) | |||||||||
WBls:0000107 | 3.87028 | From_analysis (3) | |||||||
WBls:0000108 | 1.9576 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391 | ||||||
2.33773 | From_analysis (2) | ||||||||
2.55328 | From_analysis | RNASeq.ovolvulus.WBls:0000108.control_mean | |||||||
3.36452 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393 | |||||||
WBls:0000664 | 0.107301 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396 | ||||||
0.125196 | From_analysis (2) | ||||||||
0.143091 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397 | |||||||
GO_annotation | 00261437 | ||||||||
00261438 | |||||||||
00261439 | |||||||||
00261440 | |||||||||
00261441 | |||||||||
00261442 | |||||||||
Ortholog (35) | |||||||||
Paralog (46) | |||||||||
Structured_description | Automated_description | Predicted to enable extracellular ligand-gated monoatomic ion channel activity and transmembrane signaling receptor activity. Predicted to be involved in monoatomic ion transmembrane transport. Predicted to be located in membrane. Is an ortholog of C. elegans deg-3. In C. elegans, deg-3 is involved in positive regulation of locomotion involved in locomotory behavior and regulation of programmed cell death. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | OVOC10730a | |||||||
Corresponding_CDS_history | OVOC10730:ov248 | ||||||||
Corresponding_transcript | OVOC10730a.1 | ||||||||
OVOC10730a.2 | |||||||||
Other_sequence (35) | |||||||||
Method | Gene |