WormBase Tree Display for Gene: WBGene00246391

WBGene00246391 SMap: S_parent: Sequence: OVOC_OM3_145
  Identity: Version: 2
    Name: CGC_name: Ovo-cyk-3 From_analysis: Inferred_from_orthology
      Sequence_name: OVOC9582
      Molecular_name: OVOC9582
        OVOC9582.1
        OVP01425
      Public_name: Ovo-cyk-3
    Species: Onchocerca volvulus
    History: Version_change: 1 29 Nov 2013 15:05:34 WBPerson3111 Event: Imported: MAKER import
        2 24 Jan 2014 16:01:31 WBPerson4055 Name_change: CGC_name: Ovo-cyk-3
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: cyk
    RNASeq_FPKM: WBls:0000101 6.01845 From_analysis: RNASeq.ovolvulus.total_over_all_stages.control_median
        7.22255 From_analysis: RNASeq.ovolvulus.total_over_all_stages.control_mean
      WBls:0000104 (16)
      WBls:0000107 3.55207 From_analysis: RNASeq.ovolvulus.WBls:0000107.control_mean
            RNASeq.ovolvulus.WBls:0000107.control_median
            RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
      WBls:0000108 13.7896 From_analysis: RNASeq.ovolvulus.WBls:0000108.control_mean
        16.2279 From_analysis: RNASeq.ovolvulus.WBls:0000108.control_median
            RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
        19.9624 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
        5.17838 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
      WBls:0000664 7.75877 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
        8.32149 From_analysis: RNASeq.ovolvulus.WBls:0000664.control_mean
            RNASeq.ovolvulus.WBls:0000664.control_median
        8.88421 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
    GO_annotation: 00260316
      00260317
      00260318
    Ortholog (234)
    Paralog (15)
    Structured_description: Automated_description: Predicted to enable calcium ion binding activity and cysteine-type deubiquitinase activity. Is an ortholog of C. elegans C34F6.9 and K02C4.3 and members of the C. elegans usp gene class including H34C03.2. In C. elegans, cyk-3 is involved in several processes, including cellular component organization; positive regulation of TORC1 signaling; and regulation of asymmetric protein localization involved in cell fate determination. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: OVOC9582
    Corresponding_transcript: OVOC9582.1
    Other_sequence: HC06865
      HC06748
      HC06782
      JI166697.1
      JI164674.1
      JI462484.1
  Method: Gene