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WormBase Tree Display for Gene: WBGene00240057

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Name Class

WBGene00240057SMapS_parentSequenceOVOC_OM1b_131
IdentityVersion2
NameCGC_nameOvo-lin-49From_analysisInferred_from_orthology
Sequence_nameOVOC3248
Molecular_nameOVOC3248
OVOC3248.1
OVP04012
OVOC3248.2
Public_nameOvo-lin-49
SpeciesOnchocerca volvulus
HistoryVersion_change129 Nov 2013 15:05:33WBPerson3111EventImportedMAKER import
224 Jan 2014 16:01:33WBPerson4055Name_changeCGC_nameOvo-lin-49
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classlin
RNASeq_FPKMWBls:000010116.9242From_analysisRNASeq.ovolvulus.total_over_all_stages.control_median
17.6985From_analysisRNASeq.ovolvulus.total_over_all_stages.control_mean
WBls:0000104 (16)
WBls:00001073.52888From_analysisRNASeq.ovolvulus.WBls:0000107.control_mean
RNASeq.ovolvulus.WBls:0000107.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
WBls:000010811.8286From_analysisRNASeq.ovolvulus.WBls:0000108.control_mean
13.7853From_analysisRNASeq.ovolvulus.WBls:0000108.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
19.148From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
2.55258From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
WBls:000066415.8617From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
16.9242From_analysisRNASeq.ovolvulus.WBls:0000664.control_mean
RNASeq.ovolvulus.WBls:0000664.control_median
17.9868From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
Ortholog (28)
ParalogWBGene00244095Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00244786Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00244800Onchocerca volvulusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Enhancer of polycomb-like; Zinc finger, RING/FYVE/PHD-type; PHD-finger; PHD-zinc-finger like domain; Bromodomain-like superfamily; Zinc finger, PHD-type; Zinc finger, FYVE/PHD-type; Bromodomain; and Enhancer of polycomb-like, N-terminal. Is an ortholog of C. elegans lin-49. In C. elegans, lin-49 is involved in cell fate specification; maintenance of left/right asymmetry; and positive regulation of gene expression.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSOVOC3248
Corresponding_transcriptOVOC3248.1
OVOC3248.2
Other_sequence (55)
MethodGene