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WormBase Tree Display for Gene: WBGene00234343

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Name Class

WBGene00234343SMapS_parentSequenceBm_v4_Chr1_scaffold_001
IdentityVersion6
NameCGC_nameBma-rps-28From_analysisInferred_from_orthology
Sequence_nameBm14082
Molecular_nameBm14082
Bm14082.1
BM03131
Other_nameBm-rps-28
TAG14082Curator_confirmedWBPerson4055
Bm1_18535ACurator_confirmedWBPerson4055
Bm1_18535Person_evidenceWBPerson5841
Public_nameBma-rps-28
SpeciesBrugia malayi
HistoryVersion_change110 Dec 2012 14:43:26WBPerson4055EventCreated
205 Jul 2013 11:43:21WBPerson4055Name_changeCGC_nameBma-rps-28
Other_nameBm-rps-28
308 Feb 2019 15:42:28WBPerson1983Name_changeCGC_nameRemoved
408 May 2019 10:09:24WBPerson1983Name_changeCGC_nameBma-rps-28
528 May 2021 19:05:20WBPerson1983Name_changeCGC_nameRemoved
628 Jul 2021 11:12:28WBPerson1983Name_changeCGC_nameBma-rps-28
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classrps
RNASeq_FPKM (11)
GO_annotation00250410
00250411
00250412
Contained_in_operonBMOP1715
OrthologWBGene00145586Caenorhabditis brenneriFrom_analysisWormBase-Compara
FL83_12110Caenorhabditis latensFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g07912Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g20027Panagrellus redivivusFrom_analysisWormBase-Compara
WBGene00004497Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00072258Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00244510Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00304588Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00260371Strongyloides rattiFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to be a structural constituent of ribosome. Predicted to be involved in translation. Predicted to be located in ribosome. Is an ortholog of C. elegans rps-28.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSBm14082
Corresponding_transcriptBm14082.1
Other_sequence (484)
Experimental_infoExpression_clusterWBPaper00045439:BM_Cluster_P16
WBPaper00049261:20-hydroxyecdysone_upregulated_protein
WBPaper00049974:ivermectin_1uM_48h_upregulated
WBPaper00049974:ivermectin_100nM_48h_downregulated
WBPaper00051007:upregulated_M120_vs_F120
WBPaper00061765:Adult_vs_Micro_Upregulated
WBPaper00061765:L3_vs_Adult_Upregulated
WBPaper00061765:L4_vs_Adult_Downregulated
ReferenceWBPaper00045439
Remark[190208 pad] The CGC name Bma-rps-28 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
[210528 pad] The CGC name Bma-rps-28 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
MethodGene