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WormBase Tree Display for Gene: WBGene00229620

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Name Class

WBGene00229620SMapS_parentSequenceBm_v4_Chr2_contig_001
IdentityVersion2
NameSequence_nameBm9359
Molecular_nameBm9359
Bm9359.1
Bm16639
Other_nameTAG9359Curator_confirmedWBPerson4055
Bm1_17475ACurator_confirmedWBPerson4055
TAG12242
Bm1_26670ACurator_confirmedWBPerson4055
Bm1_26670Person_evidenceWBPerson5841
Bm1_17475Person_evidenceWBPerson5841
Bm1_17470Person_evidenceWBPerson5841
Public_nameBm9359
SpeciesBrugia malayi
HistoryVersion_change110 Dec 2012 14:43:26WBPerson4055EventCreated
209 Oct 2015 09:28:24WBPerson4055EventAcquires_mergeWBGene00232503
Acquires_mergeWBGene00232503
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKM (11)
OrthologWBGene00249296Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00249297Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00249353Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00249396Onchocerca volvulusFrom_analysisWormBase-Compara
ParalogWBGene00229619Brugia malayiFrom_analysisWormBase-Compara
WBGene00229622Brugia malayiFrom_analysisWormBase-Compara
WBGene00230752Brugia malayiFrom_analysisWormBase-Compara
WBGene00230754Brugia malayiFrom_analysisWormBase-Compara
WBGene00230757Brugia malayiFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs affected by ivermectin based on RNA-seq studies. Is predicted to encode a protein with the following domains: Collagen triple helix repeat and Collagen triple helix repeat (20 copies). Is an ortholog of O. volvulus OVOC12587; OVOC12544; and OVOC12487.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSBm9359
Corresponding_transcriptBm9359.1
Other_sequenceBMC02517_1
JI465795.1
JI469768.1
OVC02566_1
JI472055.1
JI480474.1
JI482043.1
JI483689.1
Experimental_infoExpression_clusterWBPaper00049974:ivermectin_1uM_48h_upregulated
WBPaper00051007:downregulated_F120_vs_F30
WBPaper00051007:downregulated_F120_vs_F42
WBPaper00051007:downregulated_M120_vs_F120
WBPaper00061765:Adult_vs_Micro_Downregulated
WBPaper00061765:L3_vs_Adult_Upregulated
WBPaper00061765:L4_vs_Adult_Upregulated
ReferenceWBPaper00045439
MethodGene