WormBase Tree Display for Gene: WBGene00226980
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| WBGene00226980 | SMap | S_parent | Sequence | Bm_v4_ChrX_scaffold_001 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 8 | |||||||
| Name | CGC_name | Bma-slo-1 | From_analysis | Inferred_from_orthology | |||||
| Sequence_name | Bm6719 | ||||||||
| Molecular_name | Bm6719a | ||||||||
| Bm6719a.1 | |||||||||
| BM27808 | |||||||||
| Bm6719f | |||||||||
| BM32625 | |||||||||
| Bm6719f.1 | |||||||||
| Other_name | Bm-slo-1 | ||||||||
| TAG6719 | Curator_confirmed | WBPerson4055 | |||||||
| Bm1_07555A | Curator_confirmed | WBPerson4055 | |||||||
| Bm1_07560A | Curator_confirmed | WBPerson4055 | |||||||
| Bm1_07560 | Person_evidence | WBPerson5841 | |||||||
| Bm1_07555 | Person_evidence | WBPerson5841 | |||||||
| Public_name | Bma-slo-1 | ||||||||
| Species | Brugia malayi | ||||||||
| History | Version_change | 1 | 10 Dec 2012 14:43:25 | WBPerson4055 | Event | Created | |||
| 2 | 05 Jul 2013 11:43:21 | WBPerson4055 | Name_change | CGC_name | Bma-slo-1 | ||||
| Other_name | Bm-slo-1 | ||||||||
| 3 | 08 Feb 2019 15:42:29 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| 4 | 08 May 2019 10:09:22 | WBPerson1983 | Name_change | CGC_name | Bma-slo-1 | ||||
| 5 | 04 Feb 2020 15:43:57 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| 6 | 04 Jun 2020 14:38:21 | WBPerson1983 | Name_change | CGC_name | Bma-slo-1 | ||||
| 7 | 28 May 2021 19:05:21 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| 8 | 28 Jul 2021 11:12:27 | WBPerson1983 | Name_change | CGC_name | Bma-slo-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | slo | ||||||||
| RNASeq_FPKM (11) | |||||||||
| GO_annotation | 00245497 | ||||||||
| 00245498 | |||||||||
| 00245499 | |||||||||
| 00245500 | |||||||||
| 00245501 | |||||||||
| Ortholog (38) | |||||||||
| Paralog | WBGene00223450 | Brugia malayi | From_analysis | WormBase-Compara | |||||
| Structured_description | Automated_description | Predicted to enable monoatomic ion channel activity. Predicted to be involved in potassium ion transport and transmembrane transport. Predicted to be located in membrane. Is an ortholog of C. elegans slo-1. In C. elegans, slo-1 is involved in several processes, including behavioral response to ethanol; pharyngeal pumping; and sarcomere organization. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Bm6719a | |||||||
| Bm6719f | |||||||||
| Corresponding_CDS_history | Bm6719b:bm268 | ||||||||
| Bm6719b:bm273 | |||||||||
| Bm6719c:bm268 | |||||||||
| Bm6719c:bm273 | |||||||||
| Bm6719d:bm268 | |||||||||
| Bm6719e:bm268 | |||||||||
| Bm6719e:bm273 | |||||||||
| Corresponding_transcript | Bm6719a.1 | ||||||||
| Bm6719f.1 | |||||||||
| Other_sequence (57) | |||||||||
| Experimental_info | Expression_cluster | WBPaper00045439:BM_Cluster_P6 | |||||||
| WBPaper00045439:BM_Cluster_P13 | |||||||||
| WBPaper00048706:productive-tract_enriched | |||||||||
| WBPaper00051007:downregulated_F120_vs_F30 | |||||||||
| WBPaper00051007:downregulated_M30_vs_L4 | |||||||||
| WBPaper00051007:downregulated_M120_vs_F120 | |||||||||
| WBPaper00051007:upregulated_F30_vs_L4 | |||||||||
| WBPaper00051007:upregulated_M42_vs_M30 | |||||||||
| WBPaper00051007:upregulated_M120_vs_M42 | |||||||||
| Reference | WBPaper00045439 | ||||||||
| WBPaper00046171 | |||||||||
| WBPaper00058646 | |||||||||
| Remark | [190208 pad] The CGC name Bma-slo-1 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | ||||||
| [200204 pad] The CGC name Bma-slo-1 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | |||||||
| [210528 pad] The CGC name Bma-slo-1 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | |||||||
| Method | Gene |
