WormBase Tree Display for Gene: WBGene00225484
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| WBGene00225484 | SMap | S_parent | Sequence | Bm_v4_Chr3_scaffold_001 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 5 | |||||||
| Name | Sequence_name | Bm5223 | |||||||
| Molecular_name | Bm5223 | ||||||||
| Bm5223.1 | |||||||||
| BM35374 | |||||||||
| Other_name | TAG5223 | Curator_confirmed | WBPerson4055 | ||||||
| Bm1_17215A | Curator_confirmed | WBPerson4055 | |||||||
| Bm1_17215 | Person_evidence | WBPerson5841 | |||||||
| Public_name | Bm5223 | ||||||||
| Species | Brugia malayi | ||||||||
| History | Version_change | 1 | 10 Dec 2012 14:43:25 | WBPerson4055 | Event | Created | |||
| 2 | 24 Mar 2014 11:31:06 | WBPerson4055 | Name_change | CGC_name | Bma-paxt-1 | ||||
| 3 | 08 Feb 2019 15:42:28 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| 4 | 08 May 2019 10:09:21 | WBPerson1983 | Name_change | CGC_name | Bma-paxt-1 | ||||
| 5 | 28 May 2021 19:05:20 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| In_cluster | Brugia_malayi_secretome_MFES | ||||||||
| RNASeq_FPKM (11) | |||||||||
| Contained_in_operon | BMOP2193 | ||||||||
| Ortholog | WBGene00238223 | Onchocerca volvulus | From_analysis | WormBase-Compara | |||||
| WBGene00292540 | Trichuris muris | From_analysis | WormBase-Compara | ||||||
| WBGene00298324 | Trichuris muris | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Enriched in reproductive tract based on proteomic studies. Is predicted to encode a protein with the following domains: XRN2-binding (XTBD) domain and XRN-Two Binding Domain, XTBD. Is an ortholog of O. volvulus OVOC1414. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Bm5223 | |||||||
| Corresponding_transcript | Bm5223.1 | ||||||||
| Other_sequence | OF01455 | ||||||||
| JI167405.1 | |||||||||
| OF01586 | |||||||||
| JI170453.1 | |||||||||
| OFC00423_1 | |||||||||
| Experimental_info | Expression_cluster | WBPaper00048706:productive-tract_enriched | |||||||
| WBPaper00050454:Secretome_protein | |||||||||
| WBPaper00051007:downregulated_F30_vs_L4 | |||||||||
| WBPaper00051007:downregulated_M30_vs_F30 | |||||||||
| WBPaper00061765:L3_vs_Adult_Upregulated | |||||||||
| Reference | WBPaper00045439 | ||||||||
| Remark | [190208 pad] The CGC name Bma-paxt-1 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | ||||||
| [210528 pad] The CGC name Bma-paxt-1 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | |||||||
| Method | Gene |
