WormBase Tree Display for Gene: WBGene00225177
expand all nodes | collapse all nodes | view schema
| WBGene00225177 | SMap | S_parent | Sequence | Bm_v4_Chr1_scaffold_001 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 6 | |||||||
| Name | CGC_name | Bma-pdr-1 | From_analysis | Inferred_from_orthology | |||||
| Sequence_name | Bm4916 | ||||||||
| Molecular_name | Bm4916a | ||||||||
| Bm4916a.1 | |||||||||
| BM38106 | |||||||||
| Bm4916b | |||||||||
| BM39421 | |||||||||
| Bm4916c | |||||||||
| BM46322 | |||||||||
| Bm4916b.1 | |||||||||
| Bm4916c.1 | |||||||||
| Other_name | Bm-pdr-1 | ||||||||
| TAG4916 | Curator_confirmed | WBPerson4055 | |||||||
| Bm1_57385A | Curator_confirmed | WBPerson4055 | |||||||
| Bm1_57385 | Person_evidence | WBPerson5841 | |||||||
| Public_name | Bma-pdr-1 | ||||||||
| Species | Brugia malayi | ||||||||
| History | Version_change | 1 | 10 Dec 2012 14:43:25 | WBPerson4055 | Event | Created | |||
| 2 | 05 Jul 2013 11:43:21 | WBPerson4055 | Name_change | CGC_name | Bma-pdr-1 | ||||
| Other_name | Bm-pdr-1 | ||||||||
| 3 | 08 Feb 2019 15:42:29 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| 4 | 08 May 2019 10:09:21 | WBPerson1983 | Name_change | CGC_name | Bma-pdr-1 | ||||
| 5 | 28 May 2021 19:05:21 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| 6 | 28 Jul 2021 11:12:26 | WBPerson1983 | Name_change | CGC_name | Bma-pdr-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | pdr | ||||||||
| RNASeq_FPKM (11) | |||||||||
| GO_annotation | 00242859 | ||||||||
| 00242860 | |||||||||
| 00242861 | |||||||||
| 00242862 | |||||||||
| 00242863 | |||||||||
| Ortholog (27) | |||||||||
| Paralog | WBGene00221217 | Brugia malayi | From_analysis | WormBase-Compara | |||||
| WBGene00222540 | Brugia malayi | From_analysis | WormBase-Compara | ||||||
| WBGene00222684 | Brugia malayi | From_analysis | WormBase-Compara | ||||||
| WBGene00224736 | Brugia malayi | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Predicted to enable ubiquitin-protein transferase activity and zinc ion binding activity. Predicted to be involved in protein ubiquitination. Predicted to be located in cytosol and mitochondrion. Is an ortholog of C. elegans pdr-1. In C. elegans, pdr-1 is involved in several processes, including determination of adult lifespan; negative regulation of engulfment of apoptotic cell; and protein metabolic process. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Bm4916a | |||||||
| Bm4916b | |||||||||
| Bm4916c | |||||||||
| Corresponding_transcript | Bm4916a.1 | ||||||||
| Bm4916b.1 | |||||||||
| Bm4916c.1 | |||||||||
| Other_sequence (13) | |||||||||
| Experimental_info | Expression_cluster | WBPaper00045439:BM_Cluster_P10 | |||||||
| WBPaper00048706:digestive-tract_enriched | |||||||||
| WBPaper00061765:Adult_vs_Micro_Upregulated | |||||||||
| Reference | WBPaper00045439 | ||||||||
| Remark | [190208 pad] The CGC name Bma-pdr-1 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | ||||||
| [210528 pad] The CGC name Bma-pdr-1 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | |||||||
| Method | Gene |
