WormBase Tree Display for Gene: WBGene00224867
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| WBGene00224867 | SMap | S_parent | Sequence | Bm_v4_ChrX_scaffold_001 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 6 | |||||||
| Name | CGC_name | Bma-syd-2 | From_analysis | Inferred_from_orthology | |||||
| Sequence_name | Bm4606 | ||||||||
| Molecular_name | Bm4606a | ||||||||
| Bm4606a.1 | |||||||||
| BM28166 | |||||||||
| Bm4606b | |||||||||
| BM46117 | |||||||||
| Bm4606b.1 | |||||||||
| Other_name | Bm-syd-2 | ||||||||
| TAG4606 | Curator_confirmed | WBPerson4055 | |||||||
| Bm1_39890 | Person_evidence | WBPerson5841 | |||||||
| Public_name | Bma-syd-2 | ||||||||
| Species | Brugia malayi | ||||||||
| History | Version_change | 1 | 10 Dec 2012 14:43:25 | WBPerson4055 | Event | Created | |||
| 2 | 05 Jul 2013 11:43:21 | WBPerson4055 | Name_change | CGC_name | Bma-syd-2 | ||||
| Other_name | Bm-syd-2 | ||||||||
| 3 | 08 Feb 2019 15:42:30 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| 4 | 08 May 2019 10:09:25 | WBPerson1983 | Name_change | CGC_name | Bma-syd-2 | ||||
| 5 | 28 May 2021 19:05:21 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| 6 | 28 Jul 2021 11:12:29 | WBPerson1983 | Name_change | CGC_name | Bma-syd-2 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | syd | ||||||||
| RNASeq_FPKM (11) | |||||||||
| Ortholog (32) | |||||||||
| Paralog | WBGene00228814 | Brugia malayi | From_analysis | WormBase-Compara | |||||
| Structured_description | Automated_description | Is affected by ivermectin based on RNA-seq studies. Is predicted to encode a protein with the following domains: Sterile alpha motif domain; Sterile alpha motif/pointed domain superfamily; LAR-interacting protein, Liprin; Liprin-alpha; and SAM domain (Sterile alpha motif). Is an ortholog of C. elegans syd-2. In C. elegans, syd-2 is involved in several processes, including anterograde synaptic vesicle transport; egg-laying behavior; and positive regulation of anterograde synaptic vesicle transport. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Bm4606a | |||||||
| Bm4606b | |||||||||
| Corresponding_transcript | Bm4606a.1 | ||||||||
| Bm4606b.1 | |||||||||
| Other_sequence (29) | |||||||||
| Experimental_info | Expression_cluster | WBPaper00049974:ivermectin_100nM_48h_upregulated | |||||||
| WBPaper00051007:downregulated_F120_vs_F30 | |||||||||
| WBPaper00051007:downregulated_M30_vs_L4 | |||||||||
| WBPaper00051007:downregulated_M120_vs_F120 | |||||||||
| WBPaper00051007:upregulated_M120_vs_M42 | |||||||||
| WBPaper00061765:L3_vs_Adult_Upregulated | |||||||||
| WBPaper00061765:L4_vs_Adult_Upregulated | |||||||||
| Remark | [190208 pad] The CGC name Bma-syd-2 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | ||||||
| [210528 pad] The CGC name Bma-syd-2 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | |||||||
| Method | Gene |
