WormBase Tree Display for Gene: WBGene00224046
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| WBGene00224046 | SMap | S_parent | Sequence | Bm_v4_ChrX_scaffold_001 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 6 | |||||||
| Name | CGC_name | Bma-atrn-1 | From_analysis | Inferred_from_orthology | |||||
| Sequence_name | Bm3785 | ||||||||
| Molecular_name | Bm3785 | ||||||||
| Bm3785.1 | |||||||||
| BM30147 | |||||||||
| Other_name | TAG3785 | Curator_confirmed | WBPerson4055 | ||||||
| Bm1_40900 | Person_evidence | WBPerson5841 | |||||||
| Bma-tag-53 | |||||||||
| Public_name | Bma-atrn-1 | ||||||||
| Species | Brugia malayi | ||||||||
| History | Version_change | 1 | 10 Dec 2012 14:43:24 | WBPerson4055 | Event | Created | |||
| 2 | 24 Mar 2014 11:31:06 | WBPerson4055 | Name_change | CGC_name | Bma-tag-53 | ||||
| 3 | 03 Jul 2018 11:45:27 | WBPerson1983 | Name_change | CGC_name | Retired non-elegans tag gene names | ||||
| 4 | 08 May 2019 10:09:23 | WBPerson1983 | Name_change | CGC_name | Bma-atrn-1 | ||||
| 5 | 28 May 2021 19:05:20 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| 6 | 28 Jul 2021 11:12:28 | WBPerson1983 | Name_change | CGC_name | Bma-atrn-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | atrn | ||||||||
| RNASeq_FPKM (11) | |||||||||
| Ortholog (31) | |||||||||
| Paralog | WBGene00223188 | Brugia malayi | From_analysis | WormBase-Compara | |||||
| WBGene00224249 | Brugia malayi | From_analysis | WormBase-Compara | ||||||
| WBGene00225164 | Brugia malayi | From_analysis | WormBase-Compara | ||||||
| WBGene00226169 | Brugia malayi | From_analysis | WormBase-Compara | ||||||
| WBGene00226424 | Brugia malayi | From_analysis | WormBase-Compara | ||||||
| WBGene00228755 | Brugia malayi | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Is affected by ivermectin based on RNA-seq studies. Is predicted to encode a protein with the following domains: Galactose oxidase/kelch, beta-propeller; Kelch-type beta propeller; Integrin plexin domain; Integrin beta N-terminal; Spermadhesin, CUB domain superfamily; Galactose oxidase, central domain; Kelch motif; Laminin-type EGF domain; EGF-like domain; CUB domain; Laminin EGF domain; and PSI domain. Is an ortholog of C. elegans atrn-1. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Bm3785 | |||||||
| Corresponding_transcript | Bm3785.1 | ||||||||
| Other_sequence (34) | |||||||||
| Experimental_info | Expression_cluster | WBPaper00049974:ivermectin_100nM_48h_upregulated | |||||||
| WBPaper00051007:upregulated_F120_vs_F30 | |||||||||
| Remark | [210528 pad] The CGC name Bma-atrn-1 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | ||||||
| Method | Gene |
