WormBase Tree Display for Gene: WBGene00223833
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| WBGene00223833 | SMap | S_parent | Sequence | Bm_v4_Chr3_scaffold_001 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 6 | |||||||
| Name | CGC_name | Bma-cup-2 | From_analysis | Inferred_from_orthology | |||||
| Sequence_name | Bm3572 | ||||||||
| Molecular_name | Bm3572 | ||||||||
| Bm3572.1 | |||||||||
| Bm10626 | |||||||||
| Other_name | Bm-cup-2 | ||||||||
| TAG3572 | Curator_confirmed | WBPerson4055 | |||||||
| Bm1_54770A | Curator_confirmed | WBPerson4055 | |||||||
| Bm1_54770 | Person_evidence | WBPerson5841 | |||||||
| Bm1_47910 | Person_evidence | WBPerson5841 | |||||||
| Public_name | Bma-cup-2 | ||||||||
| Species | Brugia malayi | ||||||||
| History | Version_change | 1 | 10 Dec 2012 14:43:24 | WBPerson4055 | Event | Created | |||
| 2 | 05 Jul 2013 11:43:21 | WBPerson4055 | Name_change | CGC_name | Bma-cup-2 | ||||
| Other_name | Bm-cup-2 | ||||||||
| 3 | 08 Feb 2019 15:42:28 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| 4 | 08 May 2019 10:09:26 | WBPerson1983 | Name_change | CGC_name | Bma-cup-2 | ||||
| 5 | 28 May 2021 19:05:20 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| 6 | 28 Jul 2021 11:12:29 | WBPerson1983 | Name_change | CGC_name | Bma-cup-2 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | cup | ||||||||
| RNASeq_FPKM (11) | |||||||||
| Ortholog (28) | |||||||||
| Paralog | WBGene00225694 | Brugia malayi | From_analysis | WormBase-Compara | |||||
| Structured_description | Automated_description | Is affected by 20-hydroxyecdysone based on proteomic studies. Is predicted to encode a protein with the following domains: Rhomboid-like superfamily; Derlin; and Der1-like family. Is an ortholog of C. elegans cup-2. In C. elegans, cup-2 is involved in endocytosis and response to misfolded protein. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Bm3572 | |||||||
| Corresponding_transcript | Bm3572.1 | ||||||||
| Other_sequence (64) | |||||||||
| Experimental_info | Expression_cluster | WBPaper00049261:20-hydroxyecdysone_upregulated_protein | |||||||
| WBPaper00051007:downregulated_F30_vs_L4 | |||||||||
| WBPaper00051007:upregulated_F120_vs_F30 | |||||||||
| WBPaper00051007:upregulated_M30_vs_L4 | |||||||||
| WBPaper00051007:upregulated_M120_vs_F120 | |||||||||
| WBPaper00061765:L3_vs_Adult_Upregulated | |||||||||
| Reference | WBPaper00045439 | ||||||||
| Remark | [190208 pad] The CGC name Bma-cup-2 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | ||||||
| [210528 pad] The CGC name Bma-cup-2 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | |||||||
| Method | Gene |
