WormBase Tree Display for Gene: WBGene00223281
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WBGene00223281 | SMap | S_parent | Sequence | Bm_v4_Chr2_contig_001 | ||
---|---|---|---|---|---|---|
Identity | Version | 6 | ||||
Name | CGC_name | Bma-cpn-2 | From_analysis | Inferred_from_orthology | ||
Sequence_name | Bm3020 | |||||
Molecular_name | Bm3020a | |||||
Bm3020a.1 | ||||||
BM27013 | ||||||
Bm3020b | ||||||
BM47766 | ||||||
Bm3020b.1 | ||||||
Other_name | Bm-cpn-2 | |||||
TAG3020 | Curator_confirmed | WBPerson4055 | ||||
Public_name | Bma-cpn-2 | |||||
Species | Brugia malayi | |||||
History | Version_change (6) | |||||
Status | Live | |||||
Gene_info | Biotype | SO:0001217 | ||||
Gene_class | cpn | |||||
RNASeq_FPKM (11) | ||||||
Ortholog (29) | ||||||
Paralog | WBGene00223171 | Brugia malayi | From_analysis | WormBase-Compara | ||
WBGene00223447 | Brugia malayi | From_analysis | WormBase-Compara | |||
WBGene00223943 | Brugia malayi | From_analysis | WormBase-Compara | |||
WBGene00225047 | Brugia malayi | From_analysis | WormBase-Compara | |||
WBGene00226271 | Brugia malayi | From_analysis | WormBase-Compara | |||
WBGene00231502 | Brugia malayi | From_analysis | WormBase-Compara | |||
Structured_description | Automated_description | Is predicted to encode a protein with the following domains: Calponin family repeat; Calponin repeat; Smooth muscle protein/calponin; CH domain superfamily; Calponin homology domain; and Calponin homology (CH) domain. Is an ortholog of C. elegans cpn-2. | Paper_evidence | WBPaper00065943 | ||
Curator_confirmed | WBPerson324 | |||||
WBPerson37462 | ||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||
Molecular_info | Corresponding_CDS | Bm3020a | ||||
Bm3020b | ||||||
Corresponding_transcript | Bm3020a.1 | |||||
Bm3020b.1 | ||||||
Other_sequence (42) | ||||||
Experimental_info | Expression_cluster | WBPaper00051007:downregulated_F30_vs_L4 | ||||
WBPaper00051007:downregulated_M30_vs_F30 | ||||||
WBPaper00051007:upregulated_F120_vs_F30 | ||||||
WBPaper00051007:upregulated_F120_vs_F42 | ||||||
WBPaper00061765:L3_vs_Adult_Downregulated | ||||||
WBPaper00061765:L4_vs_Adult_Downregulated | ||||||
WBPaper00061765:L4_vs_Micro_Downregulated | ||||||
Reference | WBPaper00050934 | |||||
Remark | [190208 pad] The CGC name Bma-cpn-2 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | |||
[210528 pad] The CGC name Bma-cpn-2 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | ||||
Method | Gene |