WormBase Tree Display for Gene: WBGene00221933
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| WBGene00221933 | SMap | S_parent | Sequence | Bm_v4_ChrX_scaffold_001 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 6 | |||||||
| Name | CGC_name | Bma-soc-2 | From_analysis | Inferred_from_orthology | |||||
| Sequence_name | Bm1672 | ||||||||
| Molecular_name | Bm1672 | ||||||||
| Bm1672.1 | |||||||||
| BM40186 | |||||||||
| Other_name | Bm-soc-2 | ||||||||
| TAG1672 | Curator_confirmed | WBPerson4055 | |||||||
| Bm1_13125A | Curator_confirmed | WBPerson4055 | |||||||
| Bm1_13130A | Curator_confirmed | WBPerson4055 | |||||||
| Bm1_13125 | Person_evidence | WBPerson5841 | |||||||
| Bm1_13130 | Person_evidence | WBPerson5841 | |||||||
| Public_name | Bma-soc-2 | ||||||||
| Species | Brugia malayi | ||||||||
| History | Version_change | 1 | 10 Dec 2012 14:43:24 | WBPerson4055 | Event | Created | |||
| 2 | 05 Jul 2013 11:43:21 | WBPerson4055 | Name_change | CGC_name | Bma-soc-2 | ||||
| Other_name | Bm-soc-2 | ||||||||
| 3 | 08 Feb 2019 15:42:29 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| 4 | 08 May 2019 10:09:24 | WBPerson1983 | Name_change | CGC_name | Bma-soc-2 | ||||
| 5 | 28 May 2021 19:05:21 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| 6 | 28 Jul 2021 11:12:28 | WBPerson1983 | Name_change | CGC_name | Bma-soc-2 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | soc | ||||||||
| RNASeq_FPKM (11) | |||||||||
| Contained_in_operon | BMOP2618 | ||||||||
| Ortholog (34) | |||||||||
| Paralog | WBGene00223875 | Brugia malayi | From_analysis | WormBase-Compara | |||||
| WBGene00228319 | Brugia malayi | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Enriched in digestive tract based on proteomic studies. Is predicted to encode a protein with the following domains: Leucine-rich repeat; Leucine-rich repeat domain superfamily; Leucine rich repeat; and Leucine-rich repeat, typical subtype. Is an ortholog of C. elegans soc-2. In C. elegans, soc-2 is involved in several processes, including fibroblast growth factor receptor signaling pathway; positive regulation of Ras protein signal transduction; and vulval development. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Bm1672 | |||||||
| Corresponding_transcript | Bm1672.1 | ||||||||
| Other_sequence (64) | |||||||||
| Experimental_info | Expression_cluster | WBPaper00045439:BM_Cluster_P6 | |||||||
| WBPaper00045439:BM_Cluster_P9 | |||||||||
| WBPaper00048706:digestive-tract_enriched | |||||||||
| WBPaper00061765:L3_vs_Adult_Downregulated | |||||||||
| WBPaper00061765:L4_vs_Adult_Downregulated | |||||||||
| WBPaper00061765:L4_vs_Micro_Downregulated | |||||||||
| Reference | WBPaper00045439 | ||||||||
| Remark | [190208 pad] The CGC name Bma-soc-2 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | ||||||
| [210528 pad] The CGC name Bma-soc-2 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | |||||||
| Method | Gene |
