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WormBase Tree Display for Gene: WBGene00219621

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Name Class

WBGene00219621SMapS_parentSequenceY52B11A
IdentityVersion1
NameCGC_nameanr-46Person_evidenceWBPerson6396
Sequence_nameY52B11A.21
Molecular_nameY52B11A.21
Other_nameCELE_Y52B11A.21Accession_evidenceNDBBX284601
Public_nameanr-46
DB_infoDatabaseNDBlocus_tagCELE_Y52B11A.21
NCBIgene24105145
RefSeqproteinNR_101620.1
RNAcentralURSidURS000059B708
SpeciesCaenorhabditis elegans
HistoryVersion_change113 Aug 2012 10:25:36WBPerson1983EventCreated
StatusLive
Gene_infoBiotypeSO:0002182
Gene_classanr
Allele (18)
RNASeq_FPKM (74)
Structured_descriptionAutomated_descriptionIs affected by daf-2 and npr-8 based on microarray and RNA-seq studies.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_transcriptY52B11A.21
Experimental_infoExpression_clusterWBPaper00055386:daf-2(e1370)_upregulated
WBPaper00056868:P.aeruginosa_downregulated_smallRNA
WBPaper00059117:B.subtilis_upregulated
WBPaper00065096:Day10_vs_Day1_upregulated
WBPaper00065096:npr-8(ok1439)_downregulated_Day10_20C
WBPaper00065096:npr-8(ok1439)_downregulated_Day10_25C
Map_infoMapIPosition6.30352
PositivePositive_cloneY52B11AInferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
Remark[120803 pad] Created as part of a lincRNA and anti-sense RNA data submission from Nam JW, et al 2012.Paper_evidenceWBPaper00041194
Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene