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WormBase Tree Display for Gene: WBGene00219594

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Name Class

WBGene00219594SMapS_parentSequenceF57G8
IdentityVersion1
NameCGC_namelinc-59Person_evidenceWBPerson6396
Sequence_nameF57G8.15
Molecular_nameF57G8.15
Other_nameCELE_F57G8.15Accession_evidenceNDBBX284605
Public_namelinc-59
DB_infoDatabaseNDBlocus_tagCELE_F57G8.15
NCBIgene24104663
RefSeqproteinNR_102102.1
RNAcentralURSidURS00002E4DA5
SpeciesCaenorhabditis elegans
HistoryVersion_change113 Aug 2012 10:25:35WBPerson1983EventCreated
StatusLive
Gene_infoBiotypeSO:0001641
Gene_classlinc
Allele (77)
RNASeq_FPKM (74)
Structured_descriptionAutomated_descriptionIs affected by ikb-1; nfki-1; and jmjd-5 based on RNA-seq studies.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_transcriptF57G8.15
Experimental_infoRNAi_resultWBRNAi00015912Inferred_automaticallyRNAi_primary
WBRNAi00048900Inferred_automaticallyRNAi_primary
Expression_clusterWBPaper00060445:ikb-1(nr2027)_downregulated_L4
WBPaper00060445:nfki-1(cer1)_downregulated_L4
WBPaper00061613:human-alpha-Synuclein(A53T)_upregulated
WBPaper00062156:jmjd-5(zr1234)_upregulated
WBPaper00066232:hsf-1(RNAi)_upregulated_ash-2
WBPaper00066232:hsf-1(RNAi)_upregulated_WT
Map_infoMapVPosition9.97481
PositivePositive_cloneF57G8Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene