WormBase Tree Display for Gene: WBGene00219065

WBGene00219065 SMap: S_parent: Sequence: Cjap.Contig17121
  Identity: Version: 1
    Name: Sequence_name: CJA43217
      Molecular_name: CJA43217a
        CJA43217a.1
        JA13596
        CJA43217b
        JA55515
        CJA43217b.1
      Public_name: CJA43217
    Species: Caenorhabditis japonica
    History: Version_change: 1 28 Jul 2011 11:15:55 WBPerson4055 Event: Imported: Augustus import
    Status: Live
  Gene_info: Biotype: SO:0001217
    RNASeq_FPKM: WBls:0000004 0 From_analysis: RNASeq.japonica.WBls:0000004.control_mean
            RNASeq.japonica.WBls:0000004.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
      WBls:0000027 0 From_analysis: RNASeq.japonica.WBls:0000027.control_mean
            RNASeq.japonica.WBls:0000027.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
      WBls:0000038 0 From_analysis: RNASeq.japonica.WBls:0000038.control_mean
            RNASeq.japonica.WBls:0000038.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
            RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
      WBls:0000041 0.370542 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
        0.393649 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
        0.510379 From_analysis: RNASeq.japonica.WBls:0000041.control_mean
        0.534208 From_analysis: RNASeq.japonica.WBls:0000041.control_median
        0.674766 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
        0.818044 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
        0.8656 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
        0.96043 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
        0 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
            RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
      WBls:0000101 0.314079 From_analysis: RNASeq.japonica.total_over_all_stages.control_mean
        0 From_analysis: RNASeq.japonica.total_over_all_stages.control_median
    Ortholog (40)
    Paralog: WBGene00125295 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00126087 Caenorhabditis japonica From_analysis: TreeFam
            WormBase-Compara
      WBGene00133799 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00119210 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00124155 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00126237 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00207091 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00214431 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00219090 Caenorhabditis japonica From_analysis: WormBase-Compara
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: NADAR domain; NADAR; and YbiA-like superfamily. Is an ortholog of C. elegans T24A6.7 and irg-1. In C. elegans, irg-1 is involved in antibacterial innate immune response and defense response to Gram-negative bacterium. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CJA43217a
      CJA43217b
    Corresponding_transcript: CJA43217a.1
      CJA43217b.1
    Other_sequence: CBC04557_1
  Experimental_info: Expr_pattern: Expr1089374
    Microarray_results: GPL14145_CJA14595_165-224_0.469_91_C
      GPL14145_CJA14595_332-391_0.922_3_B
      GPL14145_CJA14595_484-543_0.672_64_A
  Method: Gene