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WormBase Tree Display for Gene: WBGene00211754

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Name Class

WBGene00211754SMapS_parentSequenceCjap.Contig579
IdentityVersion2
NameCGC_nameCjp-zmp-1.2From_analysisInferred_from_orthology
Sequence_nameCJA35907
Molecular_nameCJA35907a
CJA35907a.1
JA45151
CJA35907b
JA50095
CJA35907b.1
Public_nameCjp-zmp-1.2
SpeciesCaenorhabditis japonica
HistoryVersion_change128 Jul 2011 11:15:56WBPerson4055EventImportedAugustus import
208 Feb 2019 15:42:27WBPerson1983Name_changeCGC_nameCjp-zmp-1.2
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classzmp
RNASeq_FPKMWBls:00000040.455911From_analysisRNASeq.japonica.WBls:0000004.control_mean
RNASeq.japonica.WBls:0000004.control_median
RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
WBls:00000270.894422From_analysisRNASeq.japonica.WBls:0000027.control_mean
RNASeq.japonica.WBls:0000027.control_median
RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
WBls:00000380.282032From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
0.625248From_analysisRNASeq.japonica.WBls:0000038.control_mean
RNASeq.japonica.WBls:0000038.control_median
0.968465From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
WBls:00000410.105637From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
0.148912From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
0.206029From_analysisRNASeq.japonica.WBls:0000041.control_mean
0.229894From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
0.238612From_analysisRNASeq.japonica.WBls:0000041.control_median
0.247329From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
0.258906From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
0.260905From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
0.396645From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
0From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
WBls:00001010.258906From_analysisRNASeq.japonica.total_over_all_stages.control_median
0.326851From_analysisRNASeq.japonica.total_over_all_stages.control_mean
Ortholog (31)
ParalogWBGene00132991Caenorhabditis japonicaFrom_analysisInparanoid_8
WormBase-Compara
WBGene00122094Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00127836Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00130315Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00130877Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00130935Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00132799Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00210858Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00217686Caenorhabditis japonicaFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Hemopexin-like domain superfamily; Hemopexin-like repeats; and Matrix metalloproteinase-A. Is an ortholog of C. elegans zmp-1. In C. elegans, zmp-1 is involved in basement membrane disassembly.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCJA35907a
CJA35907b
Corresponding_transcriptCJA35907a.1
CJA35907b.1
MethodGene