WormBase Tree Display for Gene: WBGene00189952
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| WBGene00189952 | SMap | S_parent | Sequence | K10D2 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | K10D2.8 | |||||||
| Molecular_name | K10D2.8 | ||||||||
| K10D2.8.1 | |||||||||
| CE43691 | |||||||||
| Other_name | CELE_K10D2.8 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | K10D2.8 | ||||||||
| DB_info | Database | WormFlux | gene | WBGene00189952 | |||||
| NDB | locus_tag | CELE_K10D2.8 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00189952|UniProtKB=C4ALD3 | |||||||
| family | PTHR45973 | ||||||||
| NCBI | gene | 13189483 | |||||||
| RefSeq | protein | NM_001267995.2 | |||||||
| TREEFAM | TREEFAM_ID | TF105538 | |||||||
| TrEMBL | UniProtAcc | C4ALD3 | |||||||
| UniProt_GCRP | UniProtAcc | C4ALD3 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 20 Apr 2009 10:11:45 | WBPerson1867 | Event | Split_from | WBGene00019627 | ||
| Split_from | WBGene00019627 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (14) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (21) | |||||||||
| Paralog | WBGene00015242 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| WBGene00015516 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WormBase-Compara | |||||||||
| WBGene00011637 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00019842 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00020266 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Enriched in head mesodermal cell and in male based on RNA-seq studies. Is affected by several genes including daf-16; daf-2; and eat-2 based on microarray and RNA-seq studies. Is affected by ten chemicals including manganese chloride; Rifampin; and allantoin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Leucine Rich repeat; Leucine-rich repeat, typical subtype; Leucine rich repeat 4; Leucine-rich repeat; Leucine-rich repeat domain superfamily; and Leucine Rich repeats (2 copies). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | K10D2.8 | |||||||
| Corresponding_transcript | K10D2.8.1 | ||||||||
| Other_sequence | Dviv_isotig16471 | ||||||||
| AS09597 | |||||||||
| HG10851 | |||||||||
| CBC03004_1 | |||||||||
| JO475200.1 | |||||||||
| CR03606 | |||||||||
| JI175763.1 | |||||||||
| CRC07835_1 | |||||||||
| CJC08871_1 | |||||||||
| Experimental_info | Expr_pattern | Expr1027322 | |||||||
| Expr1154239 | |||||||||
| Expr2005033 | |||||||||
| Expr2023252 | |||||||||
| Microarray_results | GPL14144_K10D2.8_590-649_0.938_2_B | ||||||||
| GPL14144_K10D2.8_789-848_0.944_1_A | |||||||||
| GPL14144_K10D2.8_931-990_0.913_9_C | |||||||||
| GPL19516_CGZ0029038 | |||||||||
| GPL21109_K10D2.8 | |||||||||
| Expression_cluster (84) | |||||||||
| Map_info | Positive | Positive_clone | K10D2 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | III | -2.03262 | |||||||
| Reference | WBPaper00055090 | ||||||||
| Method | Gene |
