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WormBase Tree Display for Gene: WBGene00183843

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Name Class

WBGene00183843SMapS_parentSequenceCjap.Contig17582
IdentityVersion3
NameCGC_nameCjp-pgp-5From_analysisInferred_from_orthology
Sequence_nameCJA28269
Molecular_nameCJA28269
CJA28269.1
JA56613
Public_nameCjp-pgp-5
SpeciesCaenorhabditis japonica
HistoryVersion_change122 Jan 2009 15:16:36WBPerson4055EventImportedfrom WASHU
229 Jul 2011 11:13:38WBPerson4055EventImportedAugustus import
328 Jul 2021 11:12:26WBPerson1983Name_changeCGC_nameCjp-pgp-5
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classpgp
RNASeq_FPKMWBls:00000042.23957From_analysisRNASeq.japonica.WBls:0000004.control_mean
RNASeq.japonica.WBls:0000004.control_median
RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
WBls:00000276.01074From_analysisRNASeq.japonica.WBls:0000027.control_mean
RNASeq.japonica.WBls:0000027.control_median
RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
WBls:00000386.31316From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
6.67262From_analysisRNASeq.japonica.WBls:0000038.control_mean
RNASeq.japonica.WBls:0000038.control_median
7.03207From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
WBls:00000410.315617From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
0.332482From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
0.388753From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
0.474427From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
0.482064From_analysisRNASeq.japonica.WBls:0000041.control_median
0.489701From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
0.508897From_analysisRNASeq.japonica.WBls:0000041.control_mean
0.523335From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
0.57978From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
0.96708From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
WBls:00001010.523335From_analysisRNASeq.japonica.total_over_all_stages.control_median
1.97436From_analysisRNASeq.japonica.total_over_all_stages.control_mean
GO_annotation00225087
00225088
00225089
00225090
00225091
Ortholog (28)
Paralog (30)
Structured_descriptionAutomated_descriptionPredicted to enable ABC-type transporter activity; ATP binding activity; and ATP hydrolysis activity. Predicted to be involved in transmembrane transport. Predicted to be located in membrane. Is an ortholog of C. elegans pgp-5. In C. elegans, pgp-5 is involved in several processes, including defense response to bacterium; response to nematicide; and stress response to metal ion.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCJA28269
Corresponding_CDS_historyCJA28269a:jp241
Corresponding_transcriptCJA28269.1
Other_sequenceHC05950
HCC00124_1
JI225225.1
Tcol_isotig21455
JI476375.1
Experimental_infoExpr_patternExpr1078820
Expr1087790
Microarray_resultsGPL14145_CJA16423_962-1021_0.962_1_A
GPL14145_CJA28269_1375-1434_0.862_55_B
GPL14145_CJA28269_1543-1602_0.783_135_A
MethodGene