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WormBase Tree Display for Gene: WBGene00160369

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Name Class

WBGene00160369SMapS_parentSequenceCbre_Contig19
IdentityVersion2
NameCGC_nameCbn-rcan-1From_analysisInferred_from_orthology
Sequence_nameCBN21644
Molecular_nameCBN21644
CBN21644.1
CN21201
Other_nameCBN21644
Cbn-rcn-1From_analysisInferred_from_orthology
Public_nameCbn-rcan-1
SpeciesCaenorhabditis brenneri
HistoryVersion_change130 Oct 2008 10:39:28WBPerson4055EventImportedfrom NGASP
Name_changeCGC_nameCbn-rcn-1
203 Sep 2015 10:07:53WBPerson2970Name_changeCGC_nameCbn-rcan-1
Other_nameCbn-rcn-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classrcan
RNASeq_FPKMWBls:00000021.39706From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565031
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565026
RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565027
RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565030
2.2528From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565029
3.23523From_analysisRNASeq.brenneri.WBls:0000002.control_median
3.85613From_analysisRNASeq.brenneri.WBls:0000002.control_mean
4.21766From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565025
6.24838From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565024
6.30254From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565028
8.98465From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565032
9.15823From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565023
WBls:00000040From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
3.49954From_analysisRNASeq.brenneri.WBls:0000004.control_mean
RNASeq.brenneri.WBls:0000004.control_median
6.99908From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
WBls:00000240From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
54.4392From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
55.318From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
55.7956From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
58.0725From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
65.7973From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
WBls:000003834.3445From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
35.9896From_analysisRNASeq.brenneri.WBls:0000038.control_mean
RNASeq.brenneri.WBls:0000038.control_median
37.6346From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
WBls:0000041 (16)
WBls:000010116.7954From_analysisRNASeq.brenneri.total_over_all_stages.control_mean
9.15823From_analysisRNASeq.brenneri.total_over_all_stages.control_median
GO_annotation00219759
00219760
Ortholog (29)
Structured_descriptionAutomated_descriptionPredicted to enable nucleic acid binding activity. Predicted to be involved in calcium-mediated signaling. Is an ortholog of C. elegans rcan-1. In C. elegans, rcan-1 is involved in several processes, including male mating behavior; positive regulation of nematode male tail tip morphogenesis; and thermosensory behavior.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBN21644
Corresponding_transcriptCBN21644.1
Other_sequence (24)
Experimental_infoMicroarray_resultsGPL14142_CBN21644_550-609_0.615_83_A
MethodGene