WormBase Tree Display for Gene: WBGene00160020

WBGene00160020 SMap: S_parent: Sequence: Cbre_Contig653
  Identity: Version: 2
    Name: CGC_name: Cbn-phf-30 From_analysis: Inferred_from_orthology
      Sequence_name: CBN21295
      Molecular_name: CBN21295
        CBN21295.1
        CN04149
      Public_name: Cbn-phf-30
    Species: Caenorhabditis brenneri
    History: Version_change: 1 01 Oct 2008 13:29:52 WBPerson4055 Event: Imported: from NGASP
        2 14 Oct 2011 15:27:06 WBPerson2970 Name_change: CGC_name: Cbn-phf-30
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: phf
    RNASeq_FPKM: WBls:0000002 0.714683 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565029
        0.999715 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565028
        1.31831 From_analysis: RNASeq.brenneri.WBls:0000002.control_median
        1.49443 From_analysis: RNASeq.brenneri.WBls:0000002.control_mean
        1.6369 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565030
        1.98225 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565024
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565023
            RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565026
            RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565027
        2.65924 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565031
        2.67604 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565025
        4.27546 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565032
      WBls:0000004 11.7543 From_analysis: RNASeq.brenneri.WBls:0000004.control_mean
            RNASeq.brenneri.WBls:0000004.control_median
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
        23.5087 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
      WBls:0000024 10.4903 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
        12.9765 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
        13.7536 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
        9.08762 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
        9.93724 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
      WBls:0000038 11.9344 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
        12.3549 From_analysis: RNASeq.brenneri.WBls:0000038.control_mean
            RNASeq.brenneri.WBls:0000038.control_median
        12.7755 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
      WBls:0000041 (15)
      WBls:0000101 4.27546 From_analysis: RNASeq.brenneri.total_over_all_stages.control_median
        8.3484 From_analysis: RNASeq.brenneri.total_over_all_stages.control_mean
    Ortholog (17)
    Paralog: WBGene00154796 Caenorhabditis brenneri From_analysis: WormBase-Compara
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: Zinc finger, RING/FYVE/PHD-type; Zinc finger, PHD-finger; Integrator complex subunit 12; Zinc finger, PHD-type; Zinc finger, FYVE/PHD-type; and PHD-finger. Is an ortholog of C. elegans phf-30. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBN21295
    Corresponding_transcript: CBN21295.1
    Other_sequence: CBC12627_1
      CRC07143_1
      FC812340.1
      JI475066.1
      CR05055
  Experimental_info: Microarray_results: GPL14142_CBN21295_189-248_0.447_90_C
      GPL14142_CBN21295_255-314_0.781_29_B
      GPL14142_CBN21295_474-533_0.906_7_A
  Method: Gene