WormBase Tree Display for Gene: WBGene00156433

WBGene00156433 SMap: S_parent: Sequence: Cbre_Contig18
  Identity: Version: 1
    Name: CGC_name: Cbn-ptps-1 From_analysis: Inferred_from_orthology
      Sequence_name: CBN17708
      Molecular_name: CBN17708
        CBN17708.1
        CN05976
      Other_name: CBN17708
      Public_name: Cbn-ptps-1
    Species: Caenorhabditis brenneri
    History: Version_change: 1 30 Oct 2008 10:39:28 WBPerson4055 Event: Imported: from NGASP
              Name_change: CGC_name: Cbn-ptps-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: ptps
    RNASeq_FPKM: WBls:0000002 10.6354 From_analysis: RNASeq.brenneri.WBls:0000002.control_mean
        13.2943 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565032
        13.6414 From_analysis: RNASeq.brenneri.WBls:0000002.control_median
        13.9885 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565028
        16.667 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565029
        18.4911 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565024
        19.0869 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565030
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565023
            RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565026
            RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565027
        21.7055 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565031
        3.12037 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565025
      WBls:0000004 0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
        2.13417 From_analysis: RNASeq.brenneri.WBls:0000004.control_mean
            RNASeq.brenneri.WBls:0000004.control_median
        4.26834 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
      WBls:0000024 0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
        22.2397 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
        26.4853 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
        41.6068 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
        55.4728 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
        75.7983 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
      WBls:0000038 15.003 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
        17.9365 From_analysis: RNASeq.brenneri.WBls:0000038.control_mean
            RNASeq.brenneri.WBls:0000038.control_median
        20.87 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
      WBls:0000041 (12)
      WBls:0000101 10.3102 From_analysis: RNASeq.brenneri.total_over_all_stages.control_mean
        6.26072 From_analysis: RNASeq.brenneri.total_over_all_stages.control_median
    Ortholog (27)
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: 6-pyruvoyl tetrahydropterin synthase/QueD family; 6-pyruvoyl tetrahydropterin synthase/QueD superfamily; and 6-pyruvoyl tetrahydropterin synthase. Is an ortholog of C. elegans ptps-1. In C. elegans, ptps-1 is involved in tetrahydrobiopterin biosynthetic process. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBN17708
    Corresponding_transcript: CBN17708.1
    Other_sequence (13)
  Experimental_info: Microarray_results: GPL14142_CBN17708_27-86_0.885_12_C
      GPL14142_CBN17708_185-244_0.883_14_A
      GPL14142_CBN17708_213-272_0.945_3_B
  Method: Gene