WormBase Tree Display for Gene: WBGene00150979

WBGene00150979 SMap: S_parent: Sequence: Cbre_Contig62
  Identity: Version: 1
    Name: CGC_name: Cbn-rme-6 From_analysis: Inferred_from_orthology
      Sequence_name: CBN12254
      Molecular_name: CBN12254
        CBN12254.1
        CN16764
      Other_name: CBN12254
      Public_name: Cbn-rme-6
    Species: Caenorhabditis brenneri
    History: Version_change: 1 30 Oct 2008 10:39:28 WBPerson4055 Event: Imported: from NGASP
              Name_change: CGC_name: Cbn-rme-6
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: rme
    RNASeq_FPKM: WBls:0000002 (11)
      WBls:0000004 11.4042 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
        5.7021 From_analysis: RNASeq.brenneri.WBls:0000004.control_mean
            RNASeq.brenneri.WBls:0000004.control_median
      WBls:0000024 0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
        5.26476 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
        6.69102 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
        7.00715 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
        7.06788 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
        7.54662 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
      WBls:0000038 2.44407 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
        3.15158 From_analysis: RNASeq.brenneri.WBls:0000038.control_mean
            RNASeq.brenneri.WBls:0000038.control_median
        3.85909 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
      WBls:0000041 (15)
      WBls:0000101 2.32317 From_analysis: RNASeq.brenneri.total_over_all_stages.control_median
        2.53602 From_analysis: RNASeq.brenneri.total_over_all_stages.control_mean
    GO_annotation: 00212108
    Ortholog (31)
    Paralog: WBGene00148816 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00156869 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00191097 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00191152 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00191648 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00192719 Caenorhabditis brenneri From_analysis: WormBase-Compara
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: Vacuolar sorting protein 9 (VPS9) domain; GTPase-activator protein for Ras-like GTPase; VPS9 domain superfamily; Rho GTPase activation protein; VPS9 domain; and Ras GTPase-activating domain. Is an ortholog of C. elegans rme-6. In C. elegans, rme-6 is involved in endocytosis; molting cycle; and regulation of clathrin-dependent endocytosis. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBN12254
    Corresponding_transcript: CBN12254.1
    Other_sequence: CBC07466_1
      Tcol_isotig16740
      CJC01872_1
      Dviv_isotig17201
      CRC04566_1
      Dviv_isotig17202
  Experimental_info: Microarray_results: GPL14142_CBN12254_1041-1100_0.760_186_B
      GPL14142_CBN12254_3080-3139_0.941_2_C
      GPL14142_CBN12254_3232-3291_0.928_7_A
  Method: Gene