Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Gene: WBGene00146072

expand all nodes | collapse all nodes | view schema

Name Class

WBGene00146072SMapS_parentSequenceCbre_Contig36
IdentityVersion1
NameCGC_nameCbn-sma-6From_analysisInferred_from_orthology
Sequence_nameCBN07347
Molecular_nameCBN07347
CBN07347.1
CN14026
Other_nameCBN07347
Public_nameCbn-sma-6
SpeciesCaenorhabditis brenneri
HistoryVersion_change130 Oct 2008 10:39:28WBPerson4055EventImportedfrom NGASP
Name_changeCGC_nameCbn-sma-6
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classsma
RNASeq_FPKMWBls:0000002 (11)
WBls:00000040.79999From_analysisRNASeq.brenneri.WBls:0000004.control_mean
RNASeq.brenneri.WBls:0000004.control_median
1.59998From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
WBls:000002410.776From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
6.51044From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
6.8939From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
7.66497From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
8.49367From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
WBls:000003810.19From_analysisRNASeq.brenneri.WBls:0000038.control_mean
RNASeq.brenneri.WBls:0000038.control_median
11.5638From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
8.81624From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
WBls:0000041 (16)
WBls:00001012.19287From_analysisRNASeq.brenneri.total_over_all_stages.control_median
2.80483From_analysisRNASeq.brenneri.total_over_all_stages.control_mean
GO_annotation00208117
00208118
00208119
00208120
00208121
00208122
Ortholog (30)
ParalogWBGene00142756Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
WBGene00162905Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
WBGene00192546Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
WBGene00153138Caenorhabditis brenneriFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
GeneACeDB-Compara
Structured_descriptionAutomated_descriptionPredicted to enable ATP binding activity and transmembrane receptor protein serine/threonine kinase activity. Predicted to be involved in transmembrane receptor protein serine/threonine kinase signaling pathway. Predicted to be located in membrane. Is an ortholog of C. elegans sma-6. In C. elegans, sma-6 is involved in several processes, including defense response to other organism; nematode male tail tip morphogenesis; and positive regulation of nitrogen compound metabolic process.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBN07347
Corresponding_transcriptCBN07347.1
Other_sequencePPC04570_1
JI462999.1
AF013991.1
MA02523
Dviv_isotig22919
MAC02147_1
FC540838.1
JI477397.1
FC540938.1
FC552218.1
Experimental_infoMicroarray_resultsGPL14142_CBN07347_1100-1159_0.873_24_C
GPL14142_CBN07347_1382-1441_0.775_100_B
GPL14142_CBN07347_1612-1671_0.927_3_A
MethodGene