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WormBase Tree Display for Gene: WBGene00144902

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Name Class

WBGene00144902SMapS_parentSequenceCbre_Contig152
IdentityVersion2
NameCGC_nameCbn-epg-3From_analysisInferred_from_orthology
Sequence_nameCBN06177
Molecular_nameCBN06177
CBN06177.1
CN15577
Public_nameCbn-epg-3
SpeciesCaenorhabditis brenneri
HistoryVersion_change101 Oct 2008 13:29:50WBPerson4055EventImportedfrom NGASP
221 Jun 2010 10:27:21WBPerson2970Name_changeCGC_nameCbn-epg-3
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classepg
RNASeq_FPKMWBls:00000020.416818From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565024
0.420431From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565028
0.491568From_analysisRNASeq.brenneri.WBls:0000002.control_median
0.562705From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565025
0.681068From_analysisRNASeq.brenneri.WBls:0000002.control_mean
1.0326From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565030
1.20224From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565029
1.49837From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565032
1.67752From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565031
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565023
RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565026
RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565027
WBls:000000415.8766From_analysisRNASeq.brenneri.WBls:0000004.control_mean
RNASeq.brenneri.WBls:0000004.control_median
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
31.7532From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
WBls:00000240From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
20.1124From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
24.3009From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
24.7321From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
26.6363From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
30.8981From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
WBls:000003814.8198From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
16.2966From_analysisRNASeq.brenneri.WBls:0000038.control_mean
RNASeq.brenneri.WBls:0000038.control_median
17.7734From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
WBls:0000041 (17)
WBls:000010114.8198From_analysisRNASeq.brenneri.total_over_all_stages.control_median
17.6488From_analysisRNASeq.brenneri.total_over_all_stages.control_mean
Ortholog (30)
ParalogWBGene00154266Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00158807Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00162817Caenorhabditis brenneriFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs an ortholog of C. elegans epg-3. In C. elegans, epg-3 is involved in macroautophagy and negative regulation of autophagosome assembly.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBN06177
Corresponding_transcriptCBN06177.1
Other_sequence (31)
Experimental_infoMicroarray_resultsGPL14142_CBN06177_18-77_0.656_130_C
GPL14142_CBN06177_543-602_0.882_21_B
GPL14142_CBN06177_692-751_0.910_11_A
GPL14142_CBN15541_257-316_0.955_1_A
MethodGene