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WormBase Tree Display for Gene: WBGene00139434

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Name Class

WBGene00139434SMapS_parentSequenceCbre_Contig72
IdentityVersion1
NameSequence_nameCBN00709
Molecular_nameCBN00709
CBN00709.1
CN30452
Public_nameCBN00709
SpeciesCaenorhabditis brenneri
HistoryVersion_change101 Oct 2008 13:29:50WBPerson4055EventImportedfrom NGASP
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:00000020From_analysis (12)
WBls:00000040From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
RNASeq.brenneri.WBls:0000004.control_mean
RNASeq.brenneri.WBls:0000004.control_median
WBls:000002414.9513From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
5.52623From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
8.98127From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
WBls:00000380From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
RNASeq.brenneri.WBls:0000038.control_mean
RNASeq.brenneri.WBls:0000038.control_median
WBls:00000410.43236From_analysisRNASeq.brenneri.WBls:0000041.control_mean
1.8126From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191970
1.93998From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191968
0From_analysis (14)
3.16518From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191969
WBls:00001010.223154From_analysisRNASeq.brenneri.total_over_all_stages.control_mean
0From_analysisRNASeq.brenneri.total_over_all_stages.control_median
Ortholog (17)
ParalogWBGene00145242Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00152936Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00154977Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00156060Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00163885Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00163956Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00149609Caenorhabditis brenneriFrom_analysisGeneACeDB-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: LPS-induced tumour necrosis factor alpha factor; LITAF-like zinc ribbon domain; and LITAF domain containing protein. Is an ortholog of C. elegans B0348.1 and Y40H7A.11.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBN00709
Corresponding_CDS_historyCBN00709:np197
Corresponding_transcriptCBN00709.1
Experimental_infoMicroarray_resultsGPL14142_CBN00709_199-258_0.840_1_A
MethodGene