WormBase Tree Display for Gene: WBGene00138400

WBGene00138400 SMap: S_parent: Sequence: Cjap.Contig18099
  Identity: Version: 2
    Name: CGC_name: Cjp-vab-2 From_analysis: Inferred_from_orthology
      Sequence_name: CJA19195
      Molecular_name: CJA19195
        CJA19195.1
        JA58659
      Public_name: Cjp-vab-2
    Species: Caenorhabditis japonica
    History: Version_change: 1 29 Aug 2008 14:34:23 WBPerson4055 Event: Imported: from NGASP
              Name_change: CGC_name: Cjp-vab-2
        2 29 Jul 2011 11:13:38 WBPerson4055 Event: Imported: Augustus import
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: vab
    RNASeq_FPKM: WBls:0000004 45.2325 From_analysis: RNASeq.japonica.WBls:0000004.control_mean
            RNASeq.japonica.WBls:0000004.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
      WBls:0000027 18.0687 From_analysis: RNASeq.japonica.WBls:0000027.control_mean
            RNASeq.japonica.WBls:0000027.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
      WBls:0000038 10.5953 From_analysis: RNASeq.japonica.WBls:0000038.control_mean
            RNASeq.japonica.WBls:0000038.control_median
        11.5973 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
        9.5933 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
      WBls:0000041 2.07572 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
        2.517 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
        2.5726 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
        2.61527 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
        3.19981 From_analysis: RNASeq.japonica.WBls:0000041.control_median
        3.51525 From_analysis: RNASeq.japonica.WBls:0000041.control_mean
        3.78434 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
        3.90926 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
        5.15718 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
        5.49063 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
      WBls:0000101 3.90926 From_analysis: RNASeq.japonica.total_over_all_stages.control_median
        8.6626 From_analysis: RNASeq.japonica.total_over_all_stages.control_mean
    GO_annotation: 00201885
    Ortholog (26)
    Paralog: WBGene00126969 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00133236 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00206898 Caenorhabditis japonica From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to be located in membrane. Is an ortholog of C. elegans vab-2. In C. elegans, vab-2 is involved in ephrin receptor signaling pathway and epidermis morphogenesis. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CJA19195
    Corresponding_transcript: CJA19195.1
    Other_sequence: Dviv_isotig15487
      Acan_isotig10223
      DW718350.1
  Experimental_info: Expr_pattern: Expr1072682
    Microarray_results: GPL14145_CJA19195_456-515_0.926_11_B
      GPL14145_CJA19195_627-686_0.893_29_A
      GPL14145_CJA19195_718-777_0.946_3_C
  Method: Gene