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WormBase Tree Display for Gene: WBGene00136544

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Name Class

WBGene00136544SMapS_parentSequenceCjap.Contig17930
IdentityVersion2
NameCGC_nameCjp-exc-4From_analysisInferred_from_orthology
Sequence_nameCJA17340
Molecular_nameCJA17340
CJA17340.1
JA15024
Public_nameCjp-exc-4
SpeciesCaenorhabditis japonica
HistoryVersion_change129 Aug 2008 14:34:23WBPerson4055EventImportedfrom NGASP
Name_changeCGC_nameCjp-exc-4
229 Jul 2011 11:13:38WBPerson4055EventImportedAugustus import
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classexc
RNASeq_FPKMWBls:0000004103.367From_analysisRNASeq.japonica.WBls:0000004.control_mean
RNASeq.japonica.WBls:0000004.control_median
RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
WBls:000002788.5218From_analysisRNASeq.japonica.WBls:0000027.control_mean
RNASeq.japonica.WBls:0000027.control_median
RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
WBls:000003856.3045From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
56.7862From_analysisRNASeq.japonica.WBls:0000038.control_mean
RNASeq.japonica.WBls:0000038.control_median
57.2679From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
WBls:0000041127.588From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
155.939From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
173.212From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
174From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
34.233From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
36.7302From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
37.6998From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
39.5604From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
83.5742From_analysisRNASeq.japonica.WBls:0000041.control_median
97.3703From_analysisRNASeq.japonica.WBls:0000041.control_mean
WBls:000010157.2679From_analysisRNASeq.japonica.total_over_all_stages.control_median
83.4172From_analysisRNASeq.japonica.total_over_all_stages.control_mean
Ortholog (33)
ParalogWBGene00206983Caenorhabditis japonicaFrom_analysisTreeFam
WormBase-Compara
WBGene00125314Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00133421Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00134124Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00134668Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00138223Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00179684Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00207330Caenorhabditis japonicaFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Thioredoxin-like superfamily and Glutathione S-transferase, C-terminal domain superfamily. Is an ortholog of C. elegans exc-4. In C. elegans, exc-4 is involved in epithelial cell development and regulation of tube size.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCJA17340
Corresponding_transcriptCJA17340.1
Other_sequence (81)
Experimental_infoExpr_patternExpr1072032
Microarray_resultsGPL14145_CJA17340_437-496_0.747_70_B
GPL14145_CJA17340_558-617_0.857_24_C
GPL14145_CJA17340_655-714_0.841_32_A
MethodGene