WormBase Tree Display for Gene: WBGene00136108

WBGene00136108 SMap: S_parent: Sequence: Cjap.Contig18190
  Identity: Version: 2
    Name: CGC_name: Cjp-atf-6 From_analysis: Inferred_from_orthology
      Sequence_name: CJA16904
      Molecular_name: CJA16904
        CJA16904.1
        JA11141
      Public_name: Cjp-atf-6
    Species: Caenorhabditis japonica
    History: Version_change: 1 29 Aug 2008 14:34:23 WBPerson4055 Event: Imported: from NGASP
              Name_change: CGC_name: Cjp-atf-6
        2 29 Jul 2011 11:13:38 WBPerson4055 Event: Imported: Augustus import
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: atf
    RNASeq_FPKM: WBls:0000004 40.5799 From_analysis: RNASeq.japonica.WBls:0000004.control_mean
            RNASeq.japonica.WBls:0000004.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
      WBls:0000027 29.4907 From_analysis: RNASeq.japonica.WBls:0000027.control_mean
            RNASeq.japonica.WBls:0000027.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
      WBls:0000038 15.2244 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
        16.2219 From_analysis: RNASeq.japonica.WBls:0000038.control_mean
            RNASeq.japonica.WBls:0000038.control_median
        17.2194 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
      WBls:0000041 11.2023 From_analysis: RNASeq.japonica.WBls:0000041.control_median
        12.0953 From_analysis: RNASeq.japonica.WBls:0000041.control_mean
        17.9852 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
        21.2492 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
        21.4794 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
        21.6313 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
        2.77443 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
        3.30716 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
        3.9159 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
        4.41941 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
      WBls:0000101 15.3289 From_analysis: RNASeq.japonica.total_over_all_stages.control_mean
        17.2194 From_analysis: RNASeq.japonica.total_over_all_stages.control_median
    GO_annotation: 00200148
      00200149
    Ortholog (20)
    Paralog: WBGene00122954 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00136657 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00176717 Caenorhabditis japonica From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable DNA-binding transcription factor activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans atf-6. In C. elegans, atf-6 is involved in several processes, including ATF6-mediated unfolded protein response; determination of adult lifespan; and endoplasmic reticulum calcium ion homeostasis. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CJA16904
    Corresponding_transcript: CJA16904.1
  Experimental_info: Expr_pattern: Expr1084984
    Microarray_results: GPL14145_CJA16904_1329-1388_0.904_8_C
      GPL14145_CJA16904_1650-1709_0.814_66_A
      GPL14145_CJA16904_1771-1830_0.965_1_B
  Method: Gene