WormBase Tree Display for Gene: WBGene00136055

WBGene00136055 SMap: S_parent: Sequence: Cjap.Contig18166
  Identity: Version: 2
    Name: CGC_name: Cjp-lin-42 From_analysis: Inferred_from_orthology
      Sequence_name: CJA16851
      Molecular_name: CJA16851
        CJA16851.1
        JA45348
      Public_name: Cjp-lin-42
    Species: Caenorhabditis japonica
    History: Version_change: 1 29 Aug 2008 14:34:23 WBPerson4055 Event: Imported: from NGASP
              Name_change: CGC_name: Cjp-lin-42
        2 29 Jul 2011 11:13:38 WBPerson4055 Event: Imported: Augustus import
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: lin
    RNASeq_FPKM: WBls:0000004 35.4269 From_analysis: RNASeq.japonica.WBls:0000004.control_mean
            RNASeq.japonica.WBls:0000004.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
      WBls:0000027 35.9804 From_analysis: RNASeq.japonica.WBls:0000027.control_mean
            RNASeq.japonica.WBls:0000027.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
      WBls:0000038 42.7657 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
        44.6676 From_analysis: RNASeq.japonica.WBls:0000038.control_mean
            RNASeq.japonica.WBls:0000038.control_median
        46.5695 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
      WBls:0000041 0.482417 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
        0.778018 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
        0.819591 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
        1.13729 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
        1.27839 From_analysis: RNASeq.japonica.WBls:0000041.control_median
        1.38085 From_analysis: RNASeq.japonica.WBls:0000041.control_mean
        1.41949 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
        1.9407 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
        2.08996 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
        2.37935 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
      WBls:0000101 13.2146 From_analysis: RNASeq.japonica.total_over_all_stages.control_mean
        1.9407 From_analysis: RNASeq.japonica.total_over_all_stages.control_median
    Ortholog (29)
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: PAS domain and PAS domain superfamily. Is an ortholog of C. elegans lin-42. In C. elegans, lin-42 is involved in negative regulation of dauer larval development; negative regulation of miRNA transcription; and regulation of development, heterochronic. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CJA16851
    Corresponding_transcript: CJA16851.1
    Other_sequence (44)
  Experimental_info: Microarray_results: GPL14145_CJA16851_603-662_0.456_73_C
      GPL14145_CJA16851_760-819_0.537_38_B
  Method: Gene