WormBase Tree Display for Gene: WBGene00135921

WBGene00135921 SMap: S_parent: Sequence: Cjap.Contig18210
  Identity: Version: 2
    Name: CGC_name: Cjp-vem-1 From_analysis: Inferred_from_orthology
      Sequence_name: CJA16716
      Molecular_name: CJA16716a
        CJA16716a.1
        JA54516
        CJA16716b
        JA16649
        CJA16716b.1
      Public_name: Cjp-vem-1
    Species: Caenorhabditis japonica
    History: Version_change: 1 29 Aug 2008 14:34:23 WBPerson4055 Event: Imported: from NGASP
              Name_change: CGC_name: Cjp-vem-1
        2 29 Jul 2011 11:13:38 WBPerson4055 Event: Imported: Augustus import
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: vem
    RNASeq_FPKM: WBls:0000004 91.0062 From_analysis: RNASeq.japonica.WBls:0000004.control_mean
            RNASeq.japonica.WBls:0000004.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
      WBls:0000027 167.582 From_analysis: RNASeq.japonica.WBls:0000027.control_mean
            RNASeq.japonica.WBls:0000027.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
      WBls:0000038 143.842 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
        148.711 From_analysis: RNASeq.japonica.WBls:0000038.control_mean
            RNASeq.japonica.WBls:0000038.control_median
        153.58 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
      WBls:0000041 33.2359 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
        37.9736 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
        39.909 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
        40.7148 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
        57.8461 From_analysis: RNASeq.japonica.WBls:0000041.control_median
        61.4763 From_analysis: RNASeq.japonica.WBls:0000041.control_mean
        74.9775 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
        82.7991 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
        90.8903 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
        91.3101 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
      WBls:0000101 80.6016 From_analysis: RNASeq.japonica.total_over_all_stages.control_mean
        82.7991 From_analysis: RNASeq.japonica.total_over_all_stages.control_median
    Ortholog (30)
    Paralog: WBGene00123866 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00128226 Caenorhabditis japonica From_analysis: WormBase-Compara
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: Cytochrome b5-like heme/steroid binding domain; Cytochrome b5-like Heme/Steroid binding domain; and Cytochrome b5-like heme/steroid binding domain superfamily. Is an ortholog of C. elegans vem-1. In C. elegans, vem-1 is involved in innate immune response. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CJA16716a
      CJA16716b
    Corresponding_transcript: CJA16716a.1
      CJA16716b.1
    Other_sequence (22)
  Experimental_info: Expr_pattern: Expr1089313
    Microarray_results: GPL14145_CJA16716_163-222_0.918_11_A
      GPL14145_CJA16716_431-490_0.959_2_B
      GPL14145_CJA16716_496-555_0.948_5_C
  Method: Gene