WormBase Tree Display for Gene: WBGene00135879

WBGene00135879 SMap: S_parent: Sequence: Cjap.Contig17662
  Identity: Version: 2
    Name: CGC_name: Cjp-mdt-10 From_analysis: Inferred_from_orthology
      Sequence_name: CJA16676
      Molecular_name: CJA16676
        CJA16676.1
        JA42045
      Public_name: Cjp-mdt-10
    Species: Caenorhabditis japonica
    History: Version_change: 1 29 Aug 2008 14:34:23 WBPerson4055 Event: Imported: from NGASP
              Name_change: CGC_name: Cjp-mdt-10
        2 29 Jul 2011 11:13:38 WBPerson4055 Event: Imported: Augustus import
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: mdt
    RNASeq_FPKM: WBls:0000004 138.849 From_analysis: RNASeq.japonica.WBls:0000004.control_mean
            RNASeq.japonica.WBls:0000004.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
      WBls:0000027 23.5954 From_analysis: RNASeq.japonica.WBls:0000027.control_mean
            RNASeq.japonica.WBls:0000027.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
      WBls:0000038 15.2973 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
        16.3825 From_analysis: RNASeq.japonica.WBls:0000038.control_mean
            RNASeq.japonica.WBls:0000038.control_median
        17.4676 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
      WBls:0000041 123.471 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
        125.605 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
        143.328 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
        18.0866 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
        25.7626 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
        26.7661 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
        32.7864 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
        42.226 From_analysis: RNASeq.japonica.WBls:0000041.control_median
        51.6656 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
        68.4339 From_analysis: RNASeq.japonica.WBls:0000041.control_mean
      WBls:0000101 26.7661 From_analysis: RNASeq.japonica.total_over_all_stages.control_median
        57.1293 From_analysis: RNASeq.japonica.total_over_all_stages.control_mean
    GO_annotation: 00199925
      00199926
      00199927
    Ortholog (26)
    Structured_description: Automated_description: Predicted to enable transcription coregulator activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be part of mediator complex. Is an ortholog of C. elegans mdt-10. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CJA16676
    Corresponding_transcript: CJA16676.1
    Other_sequence (16)
  Experimental_info: Expr_pattern: Expr1081030
    Microarray_results: GPL14145_CJA16676_344-403_0.947_4_C
      GPL14145_CJA16676_458-517_0.942_6_B
      GPL14145_CJA16676_574-633_0.956_1_A
  Method: Gene