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WormBase Tree Display for Gene: WBGene00134535

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Name Class

WBGene00134535SMapS_parentSequenceCjap.Contig17636
IdentityVersion2
NameCGC_nameCjp-lim-7From_analysisInferred_from_orthology
Sequence_nameCJA15331
Molecular_nameCJA15331
CJA15331.1
JA03176
Public_nameCjp-lim-7
SpeciesCaenorhabditis japonica
HistoryVersion_change129 Aug 2008 14:34:23WBPerson4055EventImportedfrom NGASP
Name_changeCGC_nameCjp-lim-7
229 Jul 2011 11:13:38WBPerson4055EventImportedAugustus import
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classlim
RNASeq_FPKMWBls:000000413.0368From_analysisRNASeq.japonica.WBls:0000004.control_mean
RNASeq.japonica.WBls:0000004.control_median
RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
WBls:00000276.10053From_analysisRNASeq.japonica.WBls:0000027.control_mean
RNASeq.japonica.WBls:0000027.control_median
RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
WBls:00000382.61462From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
2.99453From_analysisRNASeq.japonica.WBls:0000038.control_mean
RNASeq.japonica.WBls:0000038.control_median
3.37445From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
WBls:00000410.909128From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
1.05388From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
1.43988From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
1.51372From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
2.27645From_analysisRNASeq.japonica.WBls:0000041.control_median
3.03919From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
3.23918From_analysisRNASeq.japonica.WBls:0000041.control_mean
5.72446From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
6.05476From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
6.17843From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
WBls:00001013.03919From_analysisRNASeq.japonica.total_over_all_stages.control_median
3.92614From_analysisRNASeq.japonica.total_over_all_stages.control_mean
GO_annotation00198877
Ortholog (31)
ParalogWBGene00120288Caenorhabditis japonicaFrom_analysisTreeFam
WBGene00125552Caenorhabditis japonicaFrom_analysisTreeFam
WBGene00127225Caenorhabditis japonicaFrom_analysisTreeFam
WBGene00130195Caenorhabditis japonicaFrom_analysisTreeFam
Structured_descriptionAutomated_descriptionPredicted to enable DNA binding activity. Is an ortholog of C. elegans lim-7. In C. elegans, lim-7 is involved in several processes, including gonad morphogenesis; head morphogenesis; and pharynx development.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCJA15331
Corresponding_transcriptCJA15331.1
Other_sequence (18)
Experimental_infoMicroarray_resultsGPL14145_CJA15331_955-1014_0.889_11_C
MethodGene