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WormBase Tree Display for Gene: WBGene00133460

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Name Class

WBGene00133460SMapS_parentSequenceCjap.Contig17598
IdentityVersion2
NameCGC_nameCjp-tig-2From_analysisInferred_from_orthology
Sequence_nameCJA14256
Molecular_nameCJA14256
CJA14256.1
JA14956
Public_nameCjp-tig-2
SpeciesCaenorhabditis japonica
HistoryVersion_change129 Aug 2008 14:34:22WBPerson4055EventImportedfrom NGASP
Name_changeCGC_nameCjp-tig-2
229 Jul 2011 11:13:38WBPerson4055EventImportedAugustus import
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classtig
RNASeq_FPKMWBls:00000042.54835From_analysisRNASeq.japonica.WBls:0000004.control_mean
RNASeq.japonica.WBls:0000004.control_median
RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
WBls:00000276.84725From_analysisRNASeq.japonica.WBls:0000027.control_mean
RNASeq.japonica.WBls:0000027.control_median
RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
WBls:00000385.16346From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
5.35845From_analysisRNASeq.japonica.WBls:0000038.control_mean
RNASeq.japonica.WBls:0000038.control_median
5.55344From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
WBls:00000412.06114From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
2.10091From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
2.50022From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
2.79568From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
2.83065From_analysisRNASeq.japonica.WBls:0000041.control_median
2.86561From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
2.87163From_analysisRNASeq.japonica.WBls:0000041.control_mean
3.17729From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
3.67879From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
3.79341From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
WBls:00001012.86561From_analysisRNASeq.japonica.total_over_all_stages.control_median
3.31427From_analysisRNASeq.japonica.total_over_all_stages.control_mean
GO_annotation00197962
00197963
Ortholog (34)
ParalogWBGene00135411Caenorhabditis japonicaFrom_analysisTreeFam
WormBase-Compara
WBGene00120154Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00129896Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00135715Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00135816Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00207977Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00212433Caenorhabditis japonicaFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable growth factor activity. Predicted to be located in extracellular region. Is an ortholog of C. elegans tig-2.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCJA14256
Corresponding_transcriptCJA14256.1
Other_sequenceCJC09002_1
JI173018.1
Hbac_isotig01669
Experimental_infoExpr_patternExpr1082008
Microarray_resultsGPL14145_CJA14256_1023-1082_0.873_16_C
GPL14145_CJA14256_806-865_0.944_1_B
GPL14145_CJA14256_931-990_0.672_84_A
MethodGene