WormBase Tree Display for Gene: WBGene00131830

WBGene00131830 SMap: S_parent: Sequence: Cjap.Contig17625
  Identity: Version: 3
    Name: CGC_name: Cjp-prp-40 From_analysis: Inferred_from_orthology
      Sequence_name: CJA12626
      Molecular_name: CJA12626
        CJA12626.1
        JA53242
      Public_name: Cjp-prp-40
    Species: Caenorhabditis japonica
    History: Version_change: 1 29 Aug 2008 14:34:22 WBPerson4055 Event: Imported: NGASP import
        2 29 Jul 2011 11:13:37 WBPerson4055 Event: Imported: Augustus import
        3 28 May 2021 19:05:19 WBPerson1983 Name_change: CGC_name: Cjp-prp-40
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: prp
    RNASeq_FPKM: WBls:0000004 53.5981 From_analysis: RNASeq.japonica.WBls:0000004.control_mean
            RNASeq.japonica.WBls:0000004.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
      WBls:0000027 26.6822 From_analysis: RNASeq.japonica.WBls:0000027.control_mean
            RNASeq.japonica.WBls:0000027.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
      WBls:0000038 19.0945 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
        20.3874 From_analysis: RNASeq.japonica.WBls:0000038.control_mean
            RNASeq.japonica.WBls:0000038.control_median
        21.6803 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
      WBls:0000041 11.9664 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
        12.3087 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
        12.4411 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
        15.4982 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
        25.0042 From_analysis: RNASeq.japonica.WBls:0000041.control_median
        25.3081 From_analysis: RNASeq.japonica.WBls:0000041.control_mean
        34.5102 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
        36.6145 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
        37.5217 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
        41.6036 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
      WBls:0000101 21.6803 From_analysis: RNASeq.japonica.total_over_all_stages.control_median
        24.8861 From_analysis: RNASeq.japonica.total_over_all_stages.control_mean
    GO_annotation: 00196683
    Ortholog (39)
    Structured_description: Automated_description: Predicted to be involved in mRNA cis splicing, via spliceosome. Is an ortholog of C. elegans prp-40. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CJA12626
    Corresponding_transcript: CJA12626.1
    Other_sequence (72)
  Experimental_info: Expr_pattern: Expr1082637
      Expr1091728
    Microarray_results: GPL14145_CJA12626_504-563_0.892_31_C
      GPL14145_CJA12626_638-697_0.851_46_B
      GPL14145_CJA12626_746-805_0.914_17_A
      GPL14145_CJA18611_919-978_0.952_1_A
  Method: Gene