WormBase Tree Display for Gene: WBGene00129560

WBGene00129560 SMap: S_parent: Sequence: Cjap.Contig17498
  Identity: Version: 2
    Name: CGC_name: Cjp-vab-19 From_analysis: Inferred_from_orthology
      Sequence_name: CJA10356
      Molecular_name: CJA10356a
        CJA10356a.1
        JA68203
        CJA10356b
        JA66981
        CJA10356b.1
      Public_name: Cjp-vab-19
    Species: Caenorhabditis japonica
    History: Version_change: 1 29 Aug 2008 14:34:22 WBPerson4055 Event: Imported: from NGASP
              Name_change: CGC_name: Cjp-vab-19
        2 29 Jul 2011 11:13:37 WBPerson4055 Event: Imported: Augustus import
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: vab
    RNASeq_FPKM: WBls:0000004 45.2841 From_analysis: RNASeq.japonica.WBls:0000004.control_mean
            RNASeq.japonica.WBls:0000004.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
      WBls:0000027 34.1059 From_analysis: RNASeq.japonica.WBls:0000027.control_mean
            RNASeq.japonica.WBls:0000027.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
      WBls:0000038 20.8089 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
        22.225 From_analysis: RNASeq.japonica.WBls:0000038.control_mean
            RNASeq.japonica.WBls:0000038.control_median
        23.6412 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
      WBls:0000041 4.79035 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
        4.79673 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
        4.80065 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
        4.90886 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
        4.90995 From_analysis: RNASeq.japonica.WBls:0000041.control_median
        4.91104 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
        5.32518 From_analysis: RNASeq.japonica.WBls:0000041.control_mean
        5.98605 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
        6.09399 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
        6.31378 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
      WBls:0000101 12.8032 From_analysis: RNASeq.japonica.total_over_all_stages.control_mean
        5.98605 From_analysis: RNASeq.japonica.total_over_all_stages.control_median
    Ortholog (29)
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: Domain of unknown function DUF3447; Ankyrin repeats (3 copies); Ankyrin repeat; Ankyrin repeats (many copies); and Ankyrin repeat-containing domain superfamily. Is an ortholog of C. elegans vab-19. In C. elegans, vab-19 is involved in several processes, including actin cytoskeleton organization; cell-cell junction maintenance; and embryo development. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CJA10356a
      CJA10356b
    Corresponding_CDS_history: CJA10356a:jp232
    Corresponding_transcript: CJA10356a.1
      CJA10356b.1
    Other_sequence (31)
  Experimental_info: Expr_pattern: Expr1083933
    Microarray_results: GPL14145_CJA10356_2499-2558_0.693_151_B
      GPL14145_CJA10356_2836-2895_0.718_123_C
      GPL14145_CJA10356_2884-2943_0.927_1_A
  Method: Gene