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WormBase Tree Display for Gene: WBGene00129305

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Name Class

WBGene00129305SMapS_parentSequenceCjap.Contig17123
IdentityVersion6
NameCGC_nameCjp-nhr-178From_analysisInferred_from_orthology
Sequence_nameCJA10101
Molecular_nameCJA10101a
CJA10101a.1
JA46480
CJA10101b
JA49234
CJA10101c
JA59376
CJA10101b.1
CJA10101c.1
Public_nameCjp-nhr-178
SpeciesCaenorhabditis japonica
HistoryVersion_change129 Aug 2008 14:34:21WBPerson4055EventImportedfrom NGASP
Name_changeCGC_nameCjp-nhr-178
229 Jul 2011 11:13:37WBPerson4055EventImportedAugustus import
308 Feb 2019 15:42:29WBPerson1983Name_changeCGC_nameRemoved
408 May 2019 10:09:26WBPerson1983Name_changeCGC_nameCjp-nhr-178
528 May 2021 19:05:21WBPerson1983Name_changeCGC_nameRemoved
628 Jul 2021 11:12:29WBPerson1983Name_changeCGC_nameCjp-nhr-178
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classnhr
RNASeq_FPKMWBls:00000040.845738From_analysisRNASeq.japonica.WBls:0000004.control_mean
RNASeq.japonica.WBls:0000004.control_median
RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
WBls:00000271.22534From_analysisRNASeq.japonica.WBls:0000027.control_mean
RNASeq.japonica.WBls:0000027.control_median
RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
WBls:00000381.34241From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
1.44778From_analysisRNASeq.japonica.WBls:0000038.control_mean
RNASeq.japonica.WBls:0000038.control_median
1.55314From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
WBls:00000410.45581From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
0.674647From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
0.819046From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
1.40306From_analysisRNASeq.japonica.WBls:0000041.control_mean
1.43845From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
1.43917From_analysisRNASeq.japonica.WBls:0000041.control_median
1.43989From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
1.45892From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
2.35415From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
2.58357From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
WBls:00001011.24547From_analysisRNASeq.japonica.total_over_all_stages.control_mean
1.34241From_analysisRNASeq.japonica.total_over_all_stages.control_median
GO_annotation00194708
00194709
00194710
00194711
Ortholog (23)
Paralog (105)
Structured_descriptionAutomated_descriptionPredicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans nhr-178.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCJA10101a
CJA10101b
CJA10101c
Corresponding_transcriptCJA10101a.1
CJA10101b.1
CJA10101c.1
Other_sequenceFD515604.1
CSC01031_1
CR03068
CRC09272_1
Experimental_infoExpr_patternExpr1088516
Microarray_resultsGPL14145_CJA10101_1206-1265_0.951_1_B
GPL14145_CJA10101_1332-1391_0.919_8_A
Remark[190208 pad] The CGC name Cjp-nhr-178 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
[210528 pad] The CGC name Cjp-nhr-178 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
MethodGene