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WormBase Tree Display for Gene: WBGene00129172

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Name Class

WBGene00129172SMapS_parentSequenceCjap.Contig18198
IdentityVersion2
NameCGC_nameCjp-npp-8From_analysisInferred_from_orthology
Sequence_nameCJA09968
Molecular_nameCJA09968
CJA09968.1
JA46943
Public_nameCjp-npp-8
SpeciesCaenorhabditis japonica
HistoryVersion_change129 Aug 2008 14:34:21WBPerson4055EventImportedfrom NGASP
Name_changeCGC_nameCjp-npp-8
229 Jul 2011 11:13:37WBPerson4055EventImportedAugustus import
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classnpp
RNASeq_FPKMWBls:000000420.0735From_analysisRNASeq.japonica.WBls:0000004.control_mean
RNASeq.japonica.WBls:0000004.control_median
RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
WBls:000002723.0751From_analysisRNASeq.japonica.WBls:0000027.control_mean
RNASeq.japonica.WBls:0000027.control_median
RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
WBls:000003822.7951From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
23.74From_analysisRNASeq.japonica.WBls:0000038.control_mean
RNASeq.japonica.WBls:0000038.control_median
24.6849From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
WBls:000004113.9179From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
28.2224From_analysisRNASeq.japonica.WBls:0000041.control_mean
28.892From_analysisRNASeq.japonica.WBls:0000041.control_median
43.8661From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
47.2151From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
48.1738From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
50.7907From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
6.91299From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
7.39986From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
7.50262From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
WBls:000010122.7951From_analysisRNASeq.japonica.total_over_all_stages.control_median
24.3391From_analysisRNASeq.japonica.total_over_all_stages.control_mean
GO_annotation00189265
00189266
00189267
Ortholog (28)
ParalogWBGene00207654Caenorhabditis japonicaFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to be a structural constituent of nuclear pore. Predicted to be involved in nucleocytoplasmic transport. Predicted to be part of nuclear pore. Is an ortholog of C. elegans npp-8. In C. elegans, npp-8 is involved in embryo development; nucleus organization; and regulation of exit from mitosis.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS292 version of WormBase
Date_last_updated24 Apr 2024 00:00:00
Molecular_infoCorresponding_CDSCJA09968
Corresponding_transcriptCJA09968.1
Other_sequenceAYC01958_1
FK807578.1
CR05357
CRC02912_1
JI245014.1
CBC00461_1
MethodGene