WormBase Tree Display for Gene: WBGene00128927

WBGene00128927 SMap: S_parent: Sequence: Cjap.Contig18210
  Identity: Version: 2
    Name: CGC_name: Cjp-hlh-8 From_analysis: Inferred_from_orthology
      Sequence_name: CJA09725
      Molecular_name: CJA09725
        CJA09725.1
        JA14445
      Public_name: Cjp-hlh-8
    Species: Caenorhabditis japonica
    History: Version_change: 1 29 Aug 2008 14:34:21 WBPerson4055 Event: Imported: from NGASP
              Name_change: CGC_name: Cjp-hlh-8
        2 29 Jul 2011 11:13:37 WBPerson4055 Event: Imported: Augustus import
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: hlh
    RNASeq_FPKM: WBls:0000004 6.94696 From_analysis: RNASeq.japonica.WBls:0000004.control_mean
            RNASeq.japonica.WBls:0000004.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
      WBls:0000027 2.64376 From_analysis: RNASeq.japonica.WBls:0000027.control_mean
            RNASeq.japonica.WBls:0000027.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
      WBls:0000038 3.09385 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
        3.761 From_analysis: RNASeq.japonica.WBls:0000038.control_mean
            RNASeq.japonica.WBls:0000038.control_median
        4.42815 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
      WBls:0000041 0.571669 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
        0.612719 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
        1.21257 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
        1.4955 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
        1.55677 From_analysis: RNASeq.japonica.WBls:0000041.control_mean
        1.6636 From_analysis: RNASeq.japonica.WBls:0000041.control_median
        1.8317 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
        2.01504 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
        2.21892 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
        2.49605 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
      WBls:0000101 2.01504 From_analysis: RNASeq.japonica.total_over_all_stages.control_median
        2.27438 From_analysis: RNASeq.japonica.total_over_all_stages.control_mean
    GO_annotation: 00194422
    Ortholog (26)
    Paralog: WBGene00124119 Caenorhabditis japonica From_analysis: TreeFam
      WBGene00128419 Caenorhabditis japonica From_analysis: TreeFam
      WBGene00138100 Caenorhabditis japonica From_analysis: TreeFam
            WormBase-Compara
      WBGene00133938 Caenorhabditis japonica From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable protein dimerization activity. Is an ortholog of C. elegans hlh-8. In C. elegans, hlh-8 is involved in mesodermal cell fate specification; positive regulation of transcription by RNA polymerase II; and vulval cell fate specification. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CJA09725
    Corresponding_transcript: CJA09725.1
    Other_sequence: Oden_isotig22148
      ES413014.1
      JI213846.1
      Dviv_isotig27720
  Experimental_info: Expr_pattern: Expr1078052
    Microarray_results: GPL14145_CJA09725_119-178_0.926_5_A
      GPL14145_CJA09725_249-308_0.940_2_B
      GPL14145_CJA09725_492-551_0.962_1_C
  Method: Gene