WormBase Tree Display for Gene: WBGene00126127

WBGene00126127 SMap: S_parent: Sequence: Cjap.Contig18025
  Identity: Version: 2
    Name: CGC_name: Cjp-clec-172 From_analysis: Inferred_from_orthology
      Sequence_name: CJA06923
      Molecular_name: CJA06923
        CJA06923.1
        JA10246
      Public_name: Cjp-clec-172
    Species: Caenorhabditis japonica
    History: Version_change: 1 29 Aug 2008 14:34:21 WBPerson4055 Event: Imported: from NGASP
              Name_change: CGC_name: Cjp-clec-172
        2 29 Jul 2011 11:13:37 WBPerson4055 Event: Imported: Augustus import
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: clec
    RNASeq_FPKM: WBls:0000004 0.318374 From_analysis: RNASeq.japonica.WBls:0000004.control_mean
            RNASeq.japonica.WBls:0000004.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
      WBls:0000027 0.60401 From_analysis: RNASeq.japonica.WBls:0000027.control_mean
            RNASeq.japonica.WBls:0000027.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
      WBls:0000038 0 From_analysis: RNASeq.japonica.WBls:0000038.control_mean
            RNASeq.japonica.WBls:0000038.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
            RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
      WBls:0000041 0.139007 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
        0.344163 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
        0.650133 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
        0.681334 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
        0.826731 From_analysis: RNASeq.japonica.WBls:0000041.control_mean
        0.836549 From_analysis: RNASeq.japonica.WBls:0000041.control_median
        0.991764 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
        1.02063 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
        1.37929 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
        1.40753 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
      WBls:0000101 0.57971 From_analysis: RNASeq.japonica.total_over_all_stages.control_mean
        0.60401 From_analysis: RNASeq.japonica.total_over_all_stages.control_median
    Ortholog (25)
    Paralog: WBGene00128595 Caenorhabditis japonica From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00127300 Caenorhabditis japonica From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00214395 Caenorhabditis japonica From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00126754 Caenorhabditis japonica From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00126708 Caenorhabditis japonica From_analysis: Inparanoid_8
            WormBase-Compara
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: C-type lectin-like/link domain superfamily; Lectin C-type domain; C-type lectin-like; and C-type lectin fold. Is an ortholog of C. elegans clec-172. In C. elegans, clec-172 is involved in defense response to Gram-positive bacterium. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CJA06923
    Corresponding_transcript: CJA06923.1
  Experimental_info: Expr_pattern: Expr1073281
    Microarray_results: GPL14145_CJA06923_233-292_0.783_48_C
      GPL14145_CJA06923_315-374_0.849_33_A
      GPL14145_CJA06923_382-441_0.872_25_B
  Method: Gene