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WormBase Tree Display for Gene: WBGene00126052

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Name Class

WBGene00126052SMapS_parentSequenceCjap.Contig18268
IdentityVersion3
NameCGC_nameCjp-fbf-1Paper_evidenceWBPaper00040859
Sequence_nameCJA06848
Molecular_nameCJA06848
CJA06848.1
JA04829
Public_nameCjp-fbf-1
SpeciesCaenorhabditis japonica
HistoryVersion_change129 Aug 2008 14:34:21WBPerson4055EventImportedNGASP import
229 Jul 2011 11:13:37WBPerson4055EventImportedAugustus import
328 Jan 2014 10:46:26WBPerson2970Name_changeCGC_nameCjp-fbf-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classfbf
RNASeq_FPKMWBls:00000042.02389From_analysisRNASeq.japonica.WBls:0000004.control_mean
RNASeq.japonica.WBls:0000004.control_median
RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
WBls:00000270.44279From_analysisRNASeq.japonica.WBls:0000027.control_mean
RNASeq.japonica.WBls:0000027.control_median
RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
WBls:00000384.76773From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
4.79064From_analysisRNASeq.japonica.WBls:0000038.control_mean
RNASeq.japonica.WBls:0000038.control_median
4.81354From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
WBls:000004110.0158From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
15.915From_analysisRNASeq.japonica.WBls:0000041.control_median
17.4553From_analysisRNASeq.japonica.WBls:0000041.control_mean
21.8141From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
2.63606From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
26.9304From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
30.2975From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
3.6423From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
3.71919From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
40.5867From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
WBls:000010111.6685From_analysisRNASeq.japonica.total_over_all_stages.control_mean
4.76773From_analysisRNASeq.japonica.total_over_all_stages.control_median
GO_annotation00192146
Ortholog (30)
ParalogWBGene00125802Caenorhabditis japonicaFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00136075Caenorhabditis japonicaFrom_analysisInparanoid_8
WormBase-Compara
WBGene00127795Caenorhabditis japonicaFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00124078Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00126897Caenorhabditis japonicaFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable RNA binding activity. Is an ortholog of C. elegans fbf-1 and fbf-2. In C. elegans, fbf-1 is involved in several processes, including germline cell cycle switching, mitotic to meiotic cell cycle; olfactory learning; and regulation of gene expression.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCJA06848
Corresponding_transcriptCJA06848.1
Other_sequenceEX544358.1
EX564883.1
JI167507.1
Experimental_infoExpr_patternExpr1075866
Expr1083311
Microarray_resultsGPL14145_CJA06848_1116-1175_0.855_33_B
GPL14145_CJA06848_1273-1332_0.896_5_C
GPL14145_CJA06848_1284-1343_0.840_45_A
GPL14145_CJA27063_90-149_0.837_1_A
InteractionWBInteraction000520061
MethodGene