WormBase Tree Display for Gene: WBGene00125029

WBGene00125029 SMap: S_parent: Sequence: Cjap.Contig17084
  Identity: Version: 2
    Name: CGC_name: Cjp-mec-18 From_analysis: Inferred_from_orthology
      Sequence_name: CJA05825
      Molecular_name: CJA05825
        CJA05825.1
        JA54162
      Public_name: Cjp-mec-18
    Species: Caenorhabditis japonica
    History: Version_change: 1 29 Aug 2008 14:34:21 WBPerson4055 Event: Imported: from NGASP
              Name_change: CGC_name: Cjp-mec-18
        2 29 Jul 2011 11:13:37 WBPerson4055 Event: Imported: Augustus import
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: mec
    RNASeq_FPKM: WBls:0000004 6.97142 From_analysis: RNASeq.japonica.WBls:0000004.control_mean
            RNASeq.japonica.WBls:0000004.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
      WBls:0000027 13.6524 From_analysis: RNASeq.japonica.WBls:0000027.control_mean
            RNASeq.japonica.WBls:0000027.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
      WBls:0000038 3.77853 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
        3.95471 From_analysis: RNASeq.japonica.WBls:0000038.control_mean
            RNASeq.japonica.WBls:0000038.control_median
        4.13089 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
      WBls:0000041 0.581375 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
        0.591074 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
        0.851646 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
        0.876058 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
        0.911029 From_analysis: RNASeq.japonica.WBls:0000041.control_median
        0.941326 From_analysis: RNASeq.japonica.WBls:0000041.control_mean
        0.945999 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
        1.05488 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
        1.25046 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
        1.37912 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
      WBls:0000101 1.05488 From_analysis: RNASeq.japonica.total_over_all_stages.control_median
        2.77414 From_analysis: RNASeq.japonica.total_over_all_stages.control_mean
    Ortholog (27)
    Paralog (16)
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: AMP-binding enzyme; ANL, N-terminal domain; AMP-binding enzyme C-terminal domain; AMP-binding enzyme, C-terminal domain; and AMP-dependent synthetase/ligase. Is an ortholog of C. elegans mec-18. In C. elegans, mec-18 is involved in detection of mechanical stimulus involved in sensory perception of touch and mechanosensory behavior. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CJA05825
    Corresponding_transcript: CJA05825.1
    Other_sequence: HC06812
      Oden_isotig26687
      Name_isotig03542
      CJC09203_1
      CBC13662_1
      Dviv_isotig32007
  Experimental_info: Expr_pattern: Expr1086507
    Microarray_results: GPL14145_CJA05825_1532-1591_0.645_226_C
      GPL14145_CJA05825_1678-1737_0.860_28_A
      GPL14145_CJA05825_1819-1878_0.917_4_B
  Method: Gene