WormBase Tree Display for Gene: WBGene00124873

WBGene00124873 SMap: S_parent: Sequence: Cjap.Contig17093
  Identity: Version: 2
    Name: CGC_name: Cjp-atf-2 From_analysis: Inferred_from_orthology
      Sequence_name: CJA05669
      Molecular_name: CJA05669
        CJA05669.1
        JA17248
      Public_name: Cjp-atf-2
    Species: Caenorhabditis japonica
    History: Version_change: 1 29 Aug 2008 14:34:21 WBPerson4055 Event: Imported: from NGASP
              Name_change: CGC_name: Cjp-atf-2
        2 29 Jul 2011 11:13:37 WBPerson4055 Event: Imported: Augustus import
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: atf
    RNASeq_FPKM: WBls:0000004 108.871 From_analysis: RNASeq.japonica.WBls:0000004.control_mean
            RNASeq.japonica.WBls:0000004.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
      WBls:0000027 19.256 From_analysis: RNASeq.japonica.WBls:0000027.control_mean
            RNASeq.japonica.WBls:0000027.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
      WBls:0000038 16.9928 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
        17.6461 From_analysis: RNASeq.japonica.WBls:0000038.control_mean
            RNASeq.japonica.WBls:0000038.control_median
        18.2994 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
      WBls:0000041 10.2887 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
        1.47654 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
        1.53025 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
        1.6676 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
        2.77899 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
        3.43884 From_analysis: RNASeq.japonica.WBls:0000041.control_median
        4.0987 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
        4.68881 From_analysis: RNASeq.japonica.WBls:0000041.control_mean
        6.08974 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
        9.57994 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
      WBls:0000101 15.4561 From_analysis: RNASeq.japonica.total_over_all_stages.control_mean
        6.08974 From_analysis: RNASeq.japonica.total_over_all_stages.control_median
    GO_annotation: 00191210
      00191211
    Ortholog (31)
    Paralog: WBGene00129859 Caenorhabditis japonica From_analysis: TreeFam
      WBGene00127208 Caenorhabditis japonica From_analysis: TreeFam
    Structured_description: Automated_description: Predicted to enable DNA-binding transcription factor activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans atf-2. In C. elegans, atf-2 is involved in negative regulation of transcription by RNA polymerase II and positive regulation of transcription by RNA polymerase II. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CJA05669
    Corresponding_transcript: CJA05669.1
    Other_sequence: Dviv_isotig14055
      Dviv_isotig14056
      CJC10881_1
      Tcir_isotig07550
  Experimental_info: Expr_pattern: Expr1077873
    Microarray_results: GPL14145_CJA05669_1186-1245_0.966_1_C
      GPL14145_CJA05669_257-316_0.868_11_B
      GPL14145_CJA05669_887-946_0.865_12_A
  Method: Gene