WormBase Tree Display for Gene: WBGene00124567

WBGene00124567 SMap: S_parent: Sequence: Cjap.Contig17175
  Identity: Version: 2
    Name: CGC_name: Cjp-rde-1 From_analysis: Inferred_from_orthology
      Sequence_name: CJA05363
      Molecular_name: CJA05363
        CJA05363.1
        JA45228
      Public_name: Cjp-rde-1
    Species: Caenorhabditis japonica
    History: Version_change: 1 29 Aug 2008 14:34:21 WBPerson4055 Event: Imported: from NGASP
              Name_change: CGC_name: Cjp-rde-1
        2 29 Jul 2011 11:13:37 WBPerson4055 Event: Imported: Augustus import
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: rde
    RNASeq_FPKM: WBls:0000004 6.1613 From_analysis: RNASeq.japonica.WBls:0000004.control_mean
            RNASeq.japonica.WBls:0000004.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
      WBls:0000027 6.58842 From_analysis: RNASeq.japonica.WBls:0000027.control_mean
            RNASeq.japonica.WBls:0000027.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
      WBls:0000038 3.40193 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
        4.15533 From_analysis: RNASeq.japonica.WBls:0000038.control_mean
            RNASeq.japonica.WBls:0000038.control_median
        4.90873 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
      WBls:0000041 2.77995 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
        2.90085 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
        3.06596 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
        4.49104 From_analysis: RNASeq.japonica.WBls:0000041.control_mean
        4.69258 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
        4.77146 From_analysis: RNASeq.japonica.WBls:0000041.control_median
        4.85034 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
        5.27089 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
        5.69602 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
        6.67171 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
      WBls:0000101 4.38375 From_analysis: RNASeq.japonica.total_over_all_stages.control_mean
        4.85034 From_analysis: RNASeq.japonica.total_over_all_stages.control_median
    GO_annotation: 00190959
    Ortholog (32)
    Paralog (19)
    Structured_description: Automated_description: Predicted to enable nucleic acid binding activity. Is an ortholog of C. elegans rde-1. In C. elegans, rde-1 is involved in obsolete conversion of ds siRNA to ss siRNA involved in RNA interference; regulatory ncRNA-mediated heterochromatin formation; and regulatory ncRNA-mediated post-transcriptional gene silencing. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CJA05363
    Corresponding_transcript: CJA05363.1
    Other_sequence: FG621042.1
      CBC11944_1
      Oden_isotig20026
      Dviv_isotig16444
  Experimental_info: Expr_pattern: Expr1078851
    Microarray_results: GPL14145_CJA05363_2034-2093_0.890_26_B
      GPL14145_CJA05363_2149-2208_0.883_30_A
      GPL14145_CJA05363_2685-2744_0.903_15_C
  Method: Gene