WormBase Tree Display for Gene: WBGene00124228

WBGene00124228 SMap: S_parent: Sequence: Cjap.Contig17303
  Identity: Version: 3
    Name: CGC_name: Cjp-phf-30 From_analysis: Inferred_from_orthology
      Sequence_name: CJA05024
      Molecular_name: CJA05024
        CJA05024.1
        JA27845
      Public_name: Cjp-phf-30
    Species: Caenorhabditis japonica
    History: Version_change: 1 29 Aug 2008 14:34:21 WBPerson4055 Event: Imported: NGASP import
        2 29 Jul 2011 11:13:37 WBPerson4055 Event: Imported: Augustus import
        3 14 Oct 2011 15:27:06 WBPerson2970 Name_change: CGC_name: Cjp-phf-30
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: phf
    RNASeq_FPKM: WBls:0000004 25.8446 From_analysis: RNASeq.japonica.WBls:0000004.control_mean
            RNASeq.japonica.WBls:0000004.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
      WBls:0000027 16.6338 From_analysis: RNASeq.japonica.WBls:0000027.control_mean
            RNASeq.japonica.WBls:0000027.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
      WBls:0000038 10.4343 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
        9.10798 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
        9.77114 From_analysis: RNASeq.japonica.WBls:0000038.control_mean
            RNASeq.japonica.WBls:0000038.control_median
      WBls:0000041 14.6142 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
        15.4816 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
        17.1759 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
        21.9326 From_analysis: RNASeq.japonica.WBls:0000041.control_median
        26.6894 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
        34.3045 From_analysis: RNASeq.japonica.WBls:0000041.control_mean
        60.0797 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
        65.1309 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
        65.8628 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
        9.40169 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
      WBls:0000101 16.6338 From_analysis: RNASeq.japonica.total_over_all_stages.control_median
        25.8813 From_analysis: RNASeq.japonica.total_over_all_stages.control_mean
    Ortholog (17)
    Paralog: WBGene00132193 Caenorhabditis japonica From_analysis: WormBase-Compara
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: Zinc finger, RING/FYVE/PHD-type; Zinc finger, PHD-finger; Zinc finger, PHD-type; Zinc finger, FYVE/PHD-type; and PHD-finger. Is an ortholog of C. elegans phf-30. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CJA05024
    Corresponding_transcript: CJA05024.1
    Other_sequence: CRC07143_1
      CJC00937_1
      CR05055
      Acan_isotig06239
      CBC12627_1
  Experimental_info: Expr_pattern: Expr1083535
    Microarray_results: GPL14145_CJA05024_190-249_0.441_119_C
      GPL14145_CJA05024_257-316_0.778_42_B
      GPL14145_CJA05024_433-492_0.897_14_A
  Method: Gene